Gene Noc_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1785 
Symbol 
ID3704900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2013086 
End bp2014429 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content59% 
IMG OID637738269 
Productdivalent cation transporter 
Protein accessionYP_343786 
Protein GI77165261 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA ATGAAGAGAA CCCAAGCAAT GCGATCCCTA AGGCCCATGC TGCGCCTGGG 
ACACTCCGTG ATTTCATTGA GACGGCGTAT GCGGTCGATC TAGCTGCTTG GCTGGAGGAA
ATTCCATGCG AGGAGGCGCA GGAACAGCTT CTTGCGCTAC CCTTGCCGCG GCGGACCGAG
ACGTTCGGCT ACCTGCAACC GGATACGCAG GTAGCGCTTG CGCGCCGGCT GGACCGGCGC
GACCTGGCGG AAATTGTCAC CCAGATGAAT GCGGATGACC GCGCCGATTT GTTCAATCAT
TTAACGCCGA AGGAACAACA GTGGCTGCTG CGCGGCCTGG CGCAAGAAGA GCGCGAGGAT
ATTCGTCGTC TGTCAGCCTA TGCTGAAGGC ACCGCCGGGG CGATTATGAC CTCGGACTAT
GCCACGCTTG CCGCTGATAT GACGGCCCAT GAGGCAATTG AGTTGTTGCG GCGCGAAGCA
CCCGAGAAGG AAACCATCTA CCGGTCCTAT ATCCTGGATC GCGAGCGCCA CCTGATCGGC
TCCATCCGGC TGCACCAACT CATTCTGGCC GCCGCCGATA CGCGGATTGA AGAGATCATG
GACCATGCTC CGGTGTCCGT CGCGCTAGAT AGCGATCAAG AGCATGTCGC GCGGATGATT
GAACGTTATG ATCTATTGGC GCTGCCGGTG ATTGATGAGG ACGGCAGGTT GGTCGGCATC
GTCACCCATG ACGATGCCGC CGACGCGATG CAGGCGGAAA CGACTGAGGA TTTCCACAAG
ATTGCTACTG TCCTCCCGTT TTCACAAAGC GTGCGCGAGG CCAGCATGGG CGTGCTTTAC
AGGAAACGGA TTTTCTGGCT TGCGCTGCTG GTGTTTGGAA ATCTGTTTTC GGGCGCGGGG
ATCGCATTCT TCGAGGATAC GATCCTGGCC TATGTATCGC TCGTATTTTT TCTTCCGCTG
TTAATTGATA GCAGCGGCAA TGCTGGGTCA CAGTCGGCAA CCCTGATGGT GCGGGCGCTG
GCTACGGGCG ACGTGGCGCT GAAGGACTGG CGCGACCTGA TCCTGCGTGA ACTGTTGATT
GCGCTCGCGC TGGGGGCGAC GATGGCGCTA CTTGTTTTCC CGGTTGGGTT GCTGCGCGGC
GATTCCGAGA TCGCGCTAGT CGTAGGGTTG ACCATGCTAC TAGTCGTCAT TGTTGGCAGC
CTGGCGGGCA TGTCACTGCC CTTTCTGCTC AGCCGCCTGC GGCTTGACCC GGCAACGGCA
AGTGCGCCGC TGGTCACAAC GATATCGGAT GCAGTCGGTG TGTTGGTCTA TTTCTGGATT
GCAACGACGG TGCTGAGCCC CTGA
 
Protein sequence
MRKNEENPSN AIPKAHAAPG TLRDFIETAY AVDLAAWLEE IPCEEAQEQL LALPLPRRTE 
TFGYLQPDTQ VALARRLDRR DLAEIVTQMN ADDRADLFNH LTPKEQQWLL RGLAQEERED
IRRLSAYAEG TAGAIMTSDY ATLAADMTAH EAIELLRREA PEKETIYRSY ILDRERHLIG
SIRLHQLILA AADTRIEEIM DHAPVSVALD SDQEHVARMI ERYDLLALPV IDEDGRLVGI
VTHDDAADAM QAETTEDFHK IATVLPFSQS VREASMGVLY RKRIFWLALL VFGNLFSGAG
IAFFEDTILA YVSLVFFLPL LIDSSGNAGS QSATLMVRAL ATGDVALKDW RDLILRELLI
ALALGATMAL LVFPVGLLRG DSEIALVVGL TMLLVVIVGS LAGMSLPFLL SRLRLDPATA
SAPLVTTISD AVGVLVYFWI ATTVLSP