| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1778 |
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| Symbol | |
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| ID | 3704893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2005964 |
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| End bp | 2006983 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637738263 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_343780 |
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| Protein GI | 77165255 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.32933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGT CAACAGCGCG CAGGCTCGCT GTTAGCATAG CCGCCGTGCT AAGCGTCCTC
GGCGTGGGTA GCTATTACCT CTGGCAACAA GAACAGCATC CCCCGGCTCA ATTAACGCTC
TACGGCAATA TTGATATCCG GGAAGTCAAC CTGAGTTTTA ACGTCCCTGG CCGGATTAAA
CGCATGCTGG TAGAAGAAGG AGACAAAACC GTCCCCGGAC AGCGCCTTGC CGTCCTGGAA
CAGGATCGCT TCATCGACCG GGTGGCGGCG GCTCGGGCCC AACTGGAAAA GCAGCAGGCA
GTAGTCGAGG AACTGGAAAC AGGAAGCCGG CCTGAAGAAA TCAAAAAGGC TTGGGCGGAA
AAAGAGGCCG CCGAAATAGC CTTTAGCAAT GCCCAGAGAA TCTACAGTCG CCGCTTAACC
CTGGTCCACA CCGAGGCAGT CTCCGAGGAG ACCGCCGATG ATGCACGGGA AGTACGGGAC
CGGGCCGCCG CCAACCTGGA AGCCGCCCGT CAAGTATGGC AACTTGCGGT TAAAGGGCCG
CGTCAAGAAG ACATTCAAGC CGCCCAGGCG GAAGCACGGG CCCTTGCGGC AGCGCTGGCC
CTGGCCCAGG AAGATCTGAA AGACACTGAA ATTCAGGCTC CGGCAGCGGG GACTATCCGG
GTACGGATTC AGGAGCCAGG GGCCATCGTG ACTCTGGGCG AGCCCGTCTA TTCCCTTGCC
CTCAAAAATC CGGTATGGGT ACGGGCTTAT GTTTCGGAAC CTAATTTGGG GCGGATTTAC
CCTGGTATGC CAGTGGAAAT ATTTACGGAC AGCTACCCTG AATACCCCTT TCAAGGCCAA
ATCGGCTTTA TTTCACCTAC TGCCGAATTC ACGCCAAAAA CCGTTCAAAC GCCCGCAGTG
CGAACCAGTC TCGTCTATCG TTTTCGGGTT ATTATTGCTA ATCCCGATGA GAGATTGCGT
CAAGGAATGC CAGTTACCCT CATCATCCAT TTAAAAAAGC ATCCAAAGAG CCATTCCTAA
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| Protein sequence | MTKSTARRLA VSIAAVLSVL GVGSYYLWQQ EQHPPAQLTL YGNIDIREVN LSFNVPGRIK
RMLVEEGDKT VPGQRLAVLE QDRFIDRVAA ARAQLEKQQA VVEELETGSR PEEIKKAWAE
KEAAEIAFSN AQRIYSRRLT LVHTEAVSEE TADDAREVRD RAAANLEAAR QVWQLAVKGP
RQEDIQAAQA EARALAAALA LAQEDLKDTE IQAPAAGTIR VRIQEPGAIV TLGEPVYSLA
LKNPVWVRAY VSEPNLGRIY PGMPVEIFTD SYPEYPFQGQ IGFISPTAEF TPKTVQTPAV
RTSLVYRFRV IIANPDERLR QGMPVTLIIH LKKHPKSHS
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