Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1735 |
Symbol | fadE |
ID | 3705052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1944137 |
End bp | 1946482 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637738218 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_343737 |
Protein GI | 77165212 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.445191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACCGC CCATTCCTAG AAAAGAGCGG GTTACTTGCT TGGTTATCAA TCATAGGGGA TTGAGAATGG TTAATTTTTT CTTGTCTTTG CGGCGCAATC TGATTAGCCG GCCTGTGCTC AAGAGGGTAC GCCGGGTATT GCCCCCTCTC TCGGAGACGG AGGAGCAGGC GTTACATGCA GGTACGGTGG GTTGGGAGGC CGAGCTTTTT TCCGGTAAAC CCAATTGGCA ATACCTGCAC GATTTACCCA AGCCACGCCT TACGGAGGAG GAGCAGGCAT TTCTTGAGGG TCCGACGGAA ACACTCTGCG GGTTGCTTAA TGACTGGGAA ATTAACCATG AGCGAAAAGA CTTGCCCCTA GAGGCATGGC AATTTATCAA GAATAATGGT TTCTGGGGAA TGATTATTCC TAAAGCTTAT GGGGGATTGG AGTTCTCAGC CTTGGCTCAC TCTTCGGTGA TCGGAAAATT AGCGAGCCGG AGCGTGACGG CCGCCGTAAC CGTTATGGTG CCTAATTCAT TGGGGCCTTC GGAGCTTTTG CTGCTCTATG GAACAGAAGA ACAAAAAAGC CATTATCTCC CTCGGCTAGC CCGGGGCGAG GAGTTACCCT GTTTTGCCAT GACGGGGCCC ACGGCGGGTT CCGATGCCGC TTCCATGCCT GACTCAGGGG TGGTGTGCTA TGGCGATTAT CAAGGAAAGC GTACCTTGGG CATGAGAGTC TCCTGGAATA AACGCTATAT CACTTTAGGT CCCATTGCGA CCGTATTAGG ATTGGCGTTC CATCTTTATG ATCCAGACCA TCTACTGGGT GAGCAGGAAG ACATTGGCAT TACCCTCGCC TTGGTGCCTA CAGAAACGCC GGGTGTGCAA ATAGGACGGC GTCATTATCC CTCTTACCAA GCGTTCCAGA ACGGCCCTAC TACCGGTCAG GAGGTATTCA TGCCCCTAGA ATGGATTATT GGCGGCCAGG AGCGGGCTGG CCAAGGGTGG CAGATGCTGA TGGAATGCCT GGGGGTTGGG CGCTCCGTAT CTTTGCCTTC CATGAGTACC GGTGCCGCCA AATTATGCGC CCGCGCTACG GGGGCCTACG CCCGGGTGAG AAAACAATTC CGCTTGCCCA TTGGCAAGTT CGAAGGGGTA GAGGAGGTGT TAACCCGCAT TGCCGGCAAT GCCTACTTAC TAGATGCCCT TCGGACGGCA ACCACCGCGG CAGTGGATCA GGGGGACAAG CCTTCTACGC TTTCCGCCAT CGCCAAATAC CACTCCACCA TGCGCATGCG GGAGACTATT AACGACGCCA TGGACGTCCA TGGCGGCAAG GCCGTTTGCG AGGGGCCGAG TAACTATCTA GCCAATAGCT ACCATGCTAT TCCGGTATCC ATTACCGTGG AAGGGGCAAA TATCCTCACT CGCAGCATGA TTATTTTTGG TCAAGGCGCC ATTCGTTGTC ATCCTTATCT GCTCAAGGAG ATGCAGGCAG CGCAAAACCC CGATGAAAAG GAAGGATTAG TTGCCTTTGA CCAGGCCATA TTTGGTCATA TGGGGTTTTT GCTGTGTAAT TTTGGCCGAG CTTGGTGGCA TAACCTGAGT GGGGGGCGTT GGTCTCCTGT CCCGGAAGCG GAAGTAACGG TTGACTACTA TTATCGGCAG TTGGGGCGAA TGAGTGCCTC ATTTGCGTTG GTGGCTGATC TTACCTCGTT AATTTTGGGG GGAGAATTAA AGCGGCGGGA AAAAATATCG GCCCGCCTAG GTGACTGCCT GAGCCATCTG TATTTACTGA GTTGTCTCCT GAAGCGTTTC AAAGATGACG GCCAGCCTAG AGAAGATATT CCCTTGTTAC ATTGGTGTGG CCAGCGAGAG CTTTACCTTA TTCAGCAAAC ACTCGATGAG ATTCTCGCCA ACTATCCTTC CCGCCCTGTA GGTGGGCTAT TACGGTGGGT TTTATTTCCT TGGGGCAGAC GATTTGGAAA ACCCTCGGAT GATGTAGGGC GACAGTGTGC GGCGCTATTA TTGTCGCCTT CGAGCAGCCG GGATCGCCTG ACGGCAGGAG TTTTTCTGGG CAGTAGGGAA AAAGATCCAA TTGCCCATTT GGAGGAGGCT TTTAAAACGG TCATTGCGGC CGATGAGGCT AACAAAAAAC TGCGCCGGGC AGCCAAGGAA AGGGGACTTA AAAGTCTTTC CCTGGAAGAG GCCGTTAGCA GGGGAGTCAT TTCAGAGGTG GAAGCAAAGT TGGCTGAGAA AGCGGAAAAA CTCACCTGGG AGATTATTAC GGTCGATGAT TTTTCCCCGG AAGAGCTCAG CGGGGAGCAG GTGCTGAGGC GTGAGCAAAT CCTTTCCGGA GGATAA
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Protein sequence | MLPPIPRKER VTCLVINHRG LRMVNFFLSL RRNLISRPVL KRVRRVLPPL SETEEQALHA GTVGWEAELF SGKPNWQYLH DLPKPRLTEE EQAFLEGPTE TLCGLLNDWE INHERKDLPL EAWQFIKNNG FWGMIIPKAY GGLEFSALAH SSVIGKLASR SVTAAVTVMV PNSLGPSELL LLYGTEEQKS HYLPRLARGE ELPCFAMTGP TAGSDAASMP DSGVVCYGDY QGKRTLGMRV SWNKRYITLG PIATVLGLAF HLYDPDHLLG EQEDIGITLA LVPTETPGVQ IGRRHYPSYQ AFQNGPTTGQ EVFMPLEWII GGQERAGQGW QMLMECLGVG RSVSLPSMST GAAKLCARAT GAYARVRKQF RLPIGKFEGV EEVLTRIAGN AYLLDALRTA TTAAVDQGDK PSTLSAIAKY HSTMRMRETI NDAMDVHGGK AVCEGPSNYL ANSYHAIPVS ITVEGANILT RSMIIFGQGA IRCHPYLLKE MQAAQNPDEK EGLVAFDQAI FGHMGFLLCN FGRAWWHNLS GGRWSPVPEA EVTVDYYYRQ LGRMSASFAL VADLTSLILG GELKRREKIS ARLGDCLSHL YLLSCLLKRF KDDGQPREDI PLLHWCGQRE LYLIQQTLDE ILANYPSRPV GGLLRWVLFP WGRRFGKPSD DVGRQCAALL LSPSSSRDRL TAGVFLGSRE KDPIAHLEEA FKTVIAADEA NKKLRRAAKE RGLKSLSLEE AVSRGVISEV EAKLAEKAEK LTWEIITVDD FSPEELSGEQ VLRREQILSG G
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