Gene Noc_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1708 
Symbol 
ID3704630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1911981 
End bp1912562 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content49% 
IMG OID637738189 
Producthypothetical protein 
Protein accessionYP_343710 
Protein GI77165185 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCG GGCTCACCAG ATCTCTTAAC GGTAAGGGAG GAGGTTGGTT GCCAAAAATT 
GCTCTCATTA GGAAGATTTT AGCCTCAAGG CTGGGCGTGC TAGCTCTTTT GAGTTTAGCT 
TTGATGGCTT GCGCTACGCT TTCAAACTAT GAACGGCCAC GGGTCTATCT CACCGATTTT 
CAATTCCGGG AGGCGAGTAT GCTGGCCCAG AATTTCCTGC TGCGTTTGCG TATCGATAAC 
CCCAATGATG CCGCCTTATC CATTAATGGG ATGGAGGTAA GCCTTAATTT GAATGGACAC 
CCGCTTGCCC AGGGGCTGAG CAATCAATCT TTTTCAGTAC CTCGTTTCGG GAGCGCTGAG 
GTAGAAATGC AAGTAACCAC TACCTTCATC AACCTTGTTC AACAAATGCT TTCCCTCCAG 
GGCCAGCGGG TGCTGAATTA CGAAATTGCG GGCCAATTAC ACTTGGCCCG TGCTCTGGGT 
TTTGGCAGAC GGGTTTTTCC TTTTCAGGAG AAAGGCGTGC TGGATTTGAA AACGATGGGA 
AATAGGGACA TAAGCTTTAA TTACCCTCCA GGCAGGCGCT GA
 
Protein sequence
MKPGLTRSLN GKGGGWLPKI ALIRKILASR LGVLALLSLA LMACATLSNY ERPRVYLTDF 
QFREASMLAQ NFLLRLRIDN PNDAALSING MEVSLNLNGH PLAQGLSNQS FSVPRFGSAE 
VEMQVTTTFI NLVQQMLSLQ GQRVLNYEIA GQLHLARALG FGRRVFPFQE KGVLDLKTMG 
NRDISFNYPP GRR