| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1693 |
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| Symbol | |
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| ID | 3705606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1892547 |
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| End bp | 1894574 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637738174 |
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| Product | DNA ligase (NAD+) |
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| Protein accession | YP_343695 |
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| Protein GI | 77165170 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000392244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAGCGC CAGCCCCAGC CAAGGAGCGC ATACAAGCAT TAAAAGAATT AATAAATAAT
TATGATTACG CCTATTATGT AGTAAATAAT CCATTAGTTC CAGATTCTGA ATATGACCGT
CTGATACGGG AATTACAGGC TCTAGAAGAA AACTACCCTG AGTTGATTAC CCTGGATTCG
CCTACCCAGC GCGTGGGCGC TAAGCCCGTT AAATCCTTGG GTGAAATAAA GCATGAAATT
CCCATGCTAT CCCTAAATAA CGCTTTCCAT GAGGGAGAAT TGGCTGATTT TCACCGGCGG
GTAAAAACGC GACTGGGGAT TGAACGGGTC GATTATGCGG CCGAGCCTAA ACTTGATGGC
CTTGCCGTCA GCTTATTATA TCAAGATGGG GTGCTCGTGC AAGGTGCAAC CCGAGGCGAT
GGCATCACTG GCGAGGATAT CACCCATAAT ATCCGGACTA TTCCTACCGT CTCTTTGCGT
TTACGCGGCG AGAAAATTCC TTCCTTGCTA GAAGTACGTG GTGAAGTGTA TATGCCAAGG
CAGGGATTCG AGCAGTTTAA TCGAGAACAA ATTGCTAAGG GCGAAAAGCC TTTTGTGAAC
CCCCGCAATG CCGCTGCAGG CAGCTTACGC CAGTTAGATC CTCGGATTAC GGCAAATCGT
CCACTAGCTC TATTTTGCTA TGGCGTTGGC CAAGTGGAGG GGGGGATATT GCCTGATCGT
CATAGCGAAA TTTTGTTCCA GCTTAAGCAA TGGGGTTTGC GTATTCTTCC TTACTCGGAG
GTGGTTGAAG AGCTTGCCGG CTGTGAGAAG TACTATCAGC ATTTATTGGA TTTGCGCGAT
AAGCTCCCCT ATGAAATTGA TGGGGTGGTT TTTAAGGTGG ATTATCTCGA TCAGCAGCAA
ATTTTAGGAT CGCTTGCCCG TGCTCCCCGC TGGGCCCTTG CTTACAAATT CCCCGCCCAA
GAAGAGCTGA CTCAAATCTT GGATATTGAG GTGCAGGTAG GACGTACTGG GGCATTGACT
CCTGTGGCTC GGTTACAACC GGTTTTTGTG GGTGGAGTGA CCGTTAGTAA GGCCACCTTG
CACAATGAAG GCGAAATTCA GCGTAAGGAT ATCCGGATTG GTGATACCGT TTATGTGCGC
CGGGCGGGGG ACGTCATCCC GGAAATAGTT AAGGTGATTA TGGAACGCCG TTTACCTGAC
TCTCGCCCTT TTCAGATGCC TAGGCAATGT CCTGTTTGCG GGTCGGAGAT CGTCAAAGAA
GAAGGCGGAG CGGTGGCCCG CTGTAGTGGT GGCTTATATT GCCCGGCCCA GCGCAAGGAG
GCGATTAAAC ACTTTGCCGG ACGTCGGGCA ATGGATATCA ATGGTCTGGG AGATAAACTT
GTAGAACAGC TTACGAAACA AGGGTTGCTT AAAGATGTAG CTGATTTATA TGGCCTTACG
AAGGAGCAGC TTGCTGGATT GGAGCGTATG GGTCAAAAAT CGGCAACCAA TTTGATAAAT
GCTATTCAGC AGAGTAAGCA TACGACTTTG CCGCGTTTTC TTTACGCTCT TGGTATTCGC
GAAGTGGGAG AAGCCACCGC CCAAGTATTA GCCAAGGAGT TTGGCTCGTT AGAAGCCTTA
GCAAGCGTCA GTGAGGAGAG ATTACAGCAG GTAACGGATA TTGGGCCTAT TGTTGCTGCC
CATATTGCTG CTTTTTTCCG CCAACCACAC AACCGCCAGA TCATTCAAGG TTTACAAAAA
GCTGGGGTTT GCTGGCCGGA GGTGGAGGAT AAAGTGCAAA TTGTTCAACC TCTTTTAGGT
AGGACCTTCG TTCTGACCGG GACTCTGGAA AGCATGACCC GTGAGCAGGC CAAAGAACGT
TTGCAGGCCT TGGGAGGTAA AGTTAATGGC AGTGTTTCTC CTCATACCGA TTACTTGATA
ATAGGCGCTA ATCCTGGGTC TAAGCTAGTA AAGGCGAGAA ATCTTGGGAT TACCATTTTA
GATGAAACCT ATTTTCGAAA TTTTCTTGAC GATACTTCCT TTCCCTGA
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| Protein sequence | MVAPAPAKER IQALKELINN YDYAYYVVNN PLVPDSEYDR LIRELQALEE NYPELITLDS
PTQRVGAKPV KSLGEIKHEI PMLSLNNAFH EGELADFHRR VKTRLGIERV DYAAEPKLDG
LAVSLLYQDG VLVQGATRGD GITGEDITHN IRTIPTVSLR LRGEKIPSLL EVRGEVYMPR
QGFEQFNREQ IAKGEKPFVN PRNAAAGSLR QLDPRITANR PLALFCYGVG QVEGGILPDR
HSEILFQLKQ WGLRILPYSE VVEELAGCEK YYQHLLDLRD KLPYEIDGVV FKVDYLDQQQ
ILGSLARAPR WALAYKFPAQ EELTQILDIE VQVGRTGALT PVARLQPVFV GGVTVSKATL
HNEGEIQRKD IRIGDTVYVR RAGDVIPEIV KVIMERRLPD SRPFQMPRQC PVCGSEIVKE
EGGAVARCSG GLYCPAQRKE AIKHFAGRRA MDINGLGDKL VEQLTKQGLL KDVADLYGLT
KEQLAGLERM GQKSATNLIN AIQQSKHTTL PRFLYALGIR EVGEATAQVL AKEFGSLEAL
ASVSEERLQQ VTDIGPIVAA HIAAFFRQPH NRQIIQGLQK AGVCWPEVED KVQIVQPLLG
RTFVLTGTLE SMTREQAKER LQALGGKVNG SVSPHTDYLI IGANPGSKLV KARNLGITIL
DETYFRNFLD DTSFP
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