| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1675 |
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| Symbol | clpX |
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| ID | 3705620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1868158 |
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| End bp | 1869432 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637738152 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_343677 |
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| Protein GI | 77165152 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.262905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG ACAAGCCCCG TAGAGGTGAT GATGATAGAT TGCTTTACTG CTCTTTTTGC
GGTAAAAGCC AGCACGAGGT GCGAAAACTC ATTGCGGGCC CCTCTGTTTT CATCTGCGAT
GAATGTGTCG AGCTTTGCAA TGACATCATT CGCGAGGAAA TGCAGGATAG GCTCTCCTCC
GGCAAGAGCA GCCATCTCCC TACACCCCAT GAAATTAGGG ATATCCTGAA CCAGTATGTT
ATTGGTCAAA ATCATGCTAA AAAAGTACTA TCGGTAGCTG TTTACAATCA CTACAAACGC
CTTCAGTTAG GCAAAAAGAA CGATGACGTT GAGTTATCAA AAAGTAATAT TTTACTTATC
GGGCCTACGG GCAGTGGTAA GACCCTGCTT GCGGAGACGC TAGCGCGCTT ATTGGATGTT
CCATTTACTA TTGCTGATGC TACCACCTTG ACCGAGGCAG GCTATGTTGG CGAAGATGTG
GAGAATATTA TCCAGAAACT GCTGCAAAAA TGCGATTATG ATGTTGAAAA AGCCCAAACA
GGCATTGTGT ATGTTGATGA AATAGATAAG ATTTCTCGTA AGTCTGATAA TCCATCTATT
ACTCGCGATG TCTCTGGTGA AGGCGTACAG CAAGCTTTGC TTAAATTGAT CGAAGGAACG
ATAGCCTCGG TGCCGCCTCA GGGGGGGCGA AAACATCCGC AGCAAGAATT CCTACAGGTC
AATACAGCTA ATATTCTTTT TATTTGTGGC GGCGCTTTTG CCGGCCTTGA GAAAATTATC
CGGGATCGCT CCAAGAAAGG AGGTATCGGT TTCTCTGCTG AGGTTAAGAG TGTTGAAGAT
AAGCGGAGTA TGGGGGAGGT TTTGCAGGCC GTGGAGCCGG AAGACCTTAT TAAGTATGGC
CTGATTCCTG AATTTGTAGG GCGTATGCCA GTGGTTGCAA CTCTGGATGA ACTAGATGAG
GCTGCACTTA TCCGTATTCT TAGAGAACCC AAGAATGCTC TTACCAAGCA ATTTGCCCGC
TTGTTTGAAA TGGAAAACTG CAAGGTTGAG TTTCGCGAAG ATGCGTTGCG GGCAGTTGCA
ACTAAGGCAA TGGAGCTTAA AACCGGTGCC CGAGGATTGC GTTCCATCCT TGAAAACGTC
CTGCTCGATA CGATGTACGA TCTCCCATCA ATGGACCATG TTAGTAAAGT GGTGATTGAT
GAAAGTGTGG TTAAAGGAGA AGCGGAGCCG TTATTAATCT ATGAAAATCA GGAAACTAAA
GCGGCTTCGG ATTAA
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| Protein sequence | MNNDKPRRGD DDRLLYCSFC GKSQHEVRKL IAGPSVFICD ECVELCNDII REEMQDRLSS
GKSSHLPTPH EIRDILNQYV IGQNHAKKVL SVAVYNHYKR LQLGKKNDDV ELSKSNILLI
GPTGSGKTLL AETLARLLDV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQT
GIVYVDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLIEGT IASVPPQGGR KHPQQEFLQV
NTANILFICG GAFAGLEKII RDRSKKGGIG FSAEVKSVED KRSMGEVLQA VEPEDLIKYG
LIPEFVGRMP VVATLDELDE AALIRILREP KNALTKQFAR LFEMENCKVE FREDALRAVA
TKAMELKTGA RGLRSILENV LLDTMYDLPS MDHVSKVVID ESVVKGEAEP LLIYENQETK
AASD
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