Gene Noc_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1668 
Symbol 
ID3705648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1861075 
End bp1862097 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content47% 
IMG OID637738145 
ProductFatty acid synthesis plsX protein 
Protein accessionYP_343670 
Protein GI77165145 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.587029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGTTA CCATCGCGCT AGATGCAATG GGGGGCGATC ATGGCCCCCA GGTAGTTGTT 
CCTGCCGCAC TTAAAGTGCT TGCCGAAATG ATTAATGTAA AGTTAATTCT AATCGGTGAT
CGAGATCTAT TAAATGGTTT AGTGGCGATA CATCGGGGAG AATTGGGAAC ACGTTTGACT
ATCCAGCATG CCTCGCAGAA AGTTGAAATG GATGAAGCAC CTTCGCAAGC TTTACGGGCC
AAAAAAGATT CCTCCATGCG AATAGCTATT AATTTGGTTA AGAGCAGAAA GGCTGATGCC
TGCGTAAGTG CTGGTAATAC TGGTGCCTTG ATGGCCATTG CTCGCTTTGT GCTCAAGACT
TTACCGGGGA TTGATCGACC AGCGATTGTT TCAGCTTTGC CCACCATCCG GGGACACTGC
TATATGCTAG ACTTAGGCGC TAATGTAGAT TCAAGCGCTC AGAATTTGTA CCAATTTGCC
TTGATGGGAT CGGTATTGGC CAGTGCTATT GATAATATTA AAGAACCTTC GGTAGGGTTG
CTAAATATCG GCTCGGAAAT TATAAAAGGG AATGAGCGGA TCAAGGAGGC AGGCCGCATG
CTTTCCCAGA GTCATTTGAA CTATGTGGGG TTTGTAGAAG GAAATGATGT CTACGAAGGT
TGTGTTGATG TGGTTGTCTG CGATGGTTTC GTGGGTAACG TGGCGTTGAA ATCCAGCGAA
GGGGTCGCTC GAATGGTACG CCATTATCTC CGGGAGTCAT TCCAACGCAA TTATCTTACT
CGCTTTGCAG GCTTTCTTGC TTTACCGGTG CTCAAAGCTT TCCACCAGCG AATGGACCCC
CGGCGTTATA ATGGAGCTAA CTTACTAGGA CTTAATGGGG TGGTTATTAA AAGTCATGGA
GGAGCGGATA TAACGGCCTT TGCCCATGCC ATTCGCATTG CTGTGATTGA GGCACGTAAA
GATGTGCCCC AACATATCAG TGCCCATTTA GAGCCATGGT TATCGGAAGG ACAAGTGGTT
TGA
 
Protein sequence
MSVTIALDAM GGDHGPQVVV PAALKVLAEM INVKLILIGD RDLLNGLVAI HRGELGTRLT 
IQHASQKVEM DEAPSQALRA KKDSSMRIAI NLVKSRKADA CVSAGNTGAL MAIARFVLKT
LPGIDRPAIV SALPTIRGHC YMLDLGANVD SSAQNLYQFA LMGSVLASAI DNIKEPSVGL
LNIGSEIIKG NERIKEAGRM LSQSHLNYVG FVEGNDVYEG CVDVVVCDGF VGNVALKSSE
GVARMVRHYL RESFQRNYLT RFAGFLALPV LKAFHQRMDP RRYNGANLLG LNGVVIKSHG
GADITAFAHA IRIAVIEARK DVPQHISAHL EPWLSEGQVV