Gene Noc_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1667 
Symbol 
ID3705647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1860110 
End bp1861102 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content49% 
IMG OID637738144 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_343669 
Protein GI77165144 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.290479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATCG GAAGGACAAG TGGTTTGAGC TATGCTCGTA TCATAGGAAC CGGAGGGTTT 
CTTCCAGAAA GAGTACTCAC CAACGCTGAT TTAGAGCGCT TGGTGGATAC CTCTGATCGA
TGGATCTGGG AACGAACTGG AATTAAAGAG CGGCATGTGG CAGAACCTGA TCAAACCGCT
TGTGATCTTG CCGAATTAGC AGCTTGGAAA GCTATAGAAG CGGCAGCCAT TGCACCTCAA
GAGATTGATC TTATTATCGT GGCAACTACC ACGCCTGATC GAATTTTTCC CAGCACGGCC
TGTCTACTTC AACAGCGGTT AGATATTCAT GATTCTGCTG CTTTTGATAT TCAAGCTGTT
TGTACCGGCT TTGTTTATGC CTTGAGCGTA GCCGAGAAAT TTATTCGTAC TGGTAGCGCC
CGAACCGCCT TAGTTGTGGG TACCGAAACC TTATCTCGCA TCATCGATTG GAATGATCGC
ACCACTTGTG TGCTGTTTGG TGATGGGGCT GGGGCGGTAG TACTTCAGGC TAGCCCGGAA
CCAGGAATTC TTTCAACCCA TCTTCATGCT GATGGCAGCT ACCATCAGCT ATTGACAGTG
CCTGCGGGCA TTTCCGAGGC TTACGAACGA GTGAAGCAGG GAGAGGCTTT CATTCAGATG
AAAGGAAATG AAGTCTTCAA GATAGCGGTT CGTACTCTAG AGCGCATGGT TGAGGAGACG
TTAGCAGCTA ACCATATGAG TCAGCAGGAA ATTGATTGGC TTATTCCCCA CCAAGCCAAT
ATCCGGATCA TTGCTGCTAC CGCTAAGAAA TTGAATCTTC CTATGGAACG GGTCGTCGTT
ACTGTTGATA CCCATGGCAA TACTTCCGCT GCTTCAGTCC CACTAGCCCT CGATATAGCG
GTCCGTGATG GGCGAATCAA ACGGGGAGAT ACTCTATTAC TTGAAGCCTT TGGCGGCGGC
TTTACCTGGG GTTCCGCTCT GTTAATATAC TGA
 
Protein sequence
MVIGRTSGLS YARIIGTGGF LPERVLTNAD LERLVDTSDR WIWERTGIKE RHVAEPDQTA 
CDLAELAAWK AIEAAAIAPQ EIDLIIVATT TPDRIFPSTA CLLQQRLDIH DSAAFDIQAV
CTGFVYALSV AEKFIRTGSA RTALVVGTET LSRIIDWNDR TTCVLFGDGA GAVVLQASPE
PGILSTHLHA DGSYHQLLTV PAGISEAYER VKQGEAFIQM KGNEVFKIAV RTLERMVEET
LAANHMSQQE IDWLIPHQAN IRIIAATAKK LNLPMERVVV TVDTHGNTSA ASVPLALDIA
VRDGRIKRGD TLLLEAFGGG FTWGSALLIY