Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1656 |
Symbol | |
ID | 3705636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1850459 |
End bp | 1851592 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637738133 |
Product | aminotransferase, class V |
Protein accession | YP_343658 |
Protein GI | 77165133 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000223228 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG ATTACTCAGA CCAGTTTCCC CAGAAAAAAG GGATTATATA TCTTAATCAC GCGGCTGTTG CACCTTGGCC TCGCAGAACC GCTGCAGCGG TTAAAAACTT CGCTGAGGAA AATGTCATTA TAGGGGCTTT GCGTTACCCT CAATGGCTGG AGACGGAAAA AAAACTACGG AAATTAGCCC GCCTCCTAAT TAATGCCCCC TCAGCAGATG ATATTGCCTT AATTAAAAAT ACTTCAGAAG GCTTATCTAT CGTTGCTAGC GGCTTAGACT GGCAAGCTGG CGATAATATC GTCACGAGCA ATCAAGAATT TCCCTCTAAT CTTATTCCTT GGCAAGCATT AGCAAAACGG GGCGTCAAAC TACGTGAAAC AAATTTATCA GTAGAACCCA CACCCGAGGA CTCATTGTTA GCTCAAATAG ACGAACAGAC TCGCCTGCTG ACTATCAGTT CAGTCCAATA CGCATCAGGA CTAAAGATGG ATCTGGAAAA AATAGGCCAA TTTTGCCGAC AACGAAATAT ATTATTTTGT GTCGATGCCA TTCAAAGTTT AGGATCGCTA AATTTTGACT GTCAAACTAT TCATGCTGAT TTTGTAATTG CTGATGGCCA CAAATGGATG CTAGGTCCAG AAGGCATGGG AATATTTTAC TGTCGCCCCG AAATAAAAGA CCAATTACAG CTTCATCAGT TCGGATGGCA CATGGTAGAA GCAATTGGAG ATTACGACAA CAAAGATTGG AGTATCGCCC GCTCCGCACG ACGATTTGAA TGTGGTAGCC TAAATATGAT AGGTATTTTC GCGCTCAAAG AAAGCTTAGA TTTATTAATT AATCAAGTTA GCATAGCCCA AGTAGAGCAG GCAGTTCTTG CAAACACGGC TTATCTCGTT GAAAGAATCC AAACTGAACC GAAACTCCAA TTATTATCCT CCAGTTCTCC AGATCGGTAT TCCGGCATTG TTACCTTCAA ACACAAGAAA GTAGACTCAT CTATTCTCTA TCACCACCTA ATAGAGCAAG GAGTAATATG CGCTCTACGT GGAGGTGGTA TTCGCTTTTC TCCCCATTTT TATACGCCCA GGACGGGGCT TGTACAAGCC TTAAATTTAT GCCTGAACGT TTAA
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Protein sequence | MKKDYSDQFP QKKGIIYLNH AAVAPWPRRT AAAVKNFAEE NVIIGALRYP QWLETEKKLR KLARLLINAP SADDIALIKN TSEGLSIVAS GLDWQAGDNI VTSNQEFPSN LIPWQALAKR GVKLRETNLS VEPTPEDSLL AQIDEQTRLL TISSVQYASG LKMDLEKIGQ FCRQRNILFC VDAIQSLGSL NFDCQTIHAD FVIADGHKWM LGPEGMGIFY CRPEIKDQLQ LHQFGWHMVE AIGDYDNKDW SIARSARRFE CGSLNMIGIF ALKESLDLLI NQVSIAQVEQ AVLANTAYLV ERIQTEPKLQ LLSSSSPDRY SGIVTFKHKK VDSSILYHHL IEQGVICALR GGGIRFSPHF YTPRTGLVQA LNLCLNV
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