Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1644 |
Symbol | |
ID | 3705674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1838148 |
End bp | 1839947 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637738119 |
Product | excinuclease ABC subunit C |
Protein accession | YP_343646 |
Protein GI | 77165121 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATT TCGATATTGA TGATTTTCTG AGGAATTTAA CTCCTTGCCC AGGTGTTTAT CGTATGCTAG ACGCCAAAGG AAAAGTGCTC TATGTTGGTA AGGCAAAAAA CCTAAAAAGG CGGATAAAGA GTTATTTTAG AAATTCCAAA TTAGCACCTA AAATTCATGT TCTAGTAAAG CAAATTTGCG ATATCAAAAT TACTGTGACT CATACGGAAA ATGAAGCACT GATTCTAGAA AGTAATCTTA TTAAAGCTCT GCAACCTCGC TATAATGTAT TATTAAGGGA TGATAAGAGT TACCCTTACA TTTTTCTCTC TGCTGACGAT TTTCCCCGTT TAGGATTTCA TCGGGGGGTG AAACAAGTTT CTGGCCAATA TTTCGGCCCT TATCCAAATA TTAGATCGGT ATGGCAAACG CTGAAACTAC TTCAGAGGGT TTTTCCCGTA CGCCAGTGTG AAGATAACTT TTACCGTAAT CGTTCTCGTC CCTGTCTACA ATATCAGATC AAACGCTGCA CTGCTCCTTG CGTGGGCTTA ATCAGTAAAA AAGATTATAG TCAAGATATT CAACACGTAG TGATGTTTTT AAAAGGGCGG GATCAACAGG TTATCAATGA GTTGGTAATA CGTATGGAAG AAGCTTCCGG GCAACTTGCT TTTGAACAAG CAGCCTATTA CCGGGATCGA ATTGCTAGCT TACGCCAAAT ACAGGCACGT CAGTATATAA GCGGTGAAAA AAAAGACATT GATGTGCTTG GGGTCGCTCT TACGGAGAAA ATGGCTTGTG TGGAGGTTTT TTTTATTCGT GGTGGGCATA ATTTAGGAAA TAAGACTTTC TTACCTAAGC TTGAAGGAAA TCTAACACCA GAAGAGTTAC TTTCTACCTT TATAGCACAA TATTATTTGA ATCGAGAGAC TCCGCCCATC CTTATATTAA GCCACCAGCC TAAAGATATG GGTTTGTTAA CTGAAGTACT AAGCAAGCAG GCGGGAAGAA AGATTGCTTT GATAAAGCCA GTTCGTGGTC CCAAGGTGCA GTGGATAAAA ATGGCTTTAG CCAATGCTAA GATTAATTTA AATCAACATC TCGCAGAGAA ATCGAACATT ACCGCACGAT TTAAAAGCTT ACAGCAATTA CTAAGCTTAG CAAACTTCCC ACAACGGATT GAGTGCTTTG ATGTTAGTCA TATTCAAGGA ACGGCTACAG TGGCTTCCTG CGTAGTATTT GATAGAGAGG GTCCCCGTAA GGCTGATTAC CGTCGTTTTA ATATCACAGG GATCATTCCA GGGGATGATT ATGGAGCCTT ACGTCAAGCG TTAATGCGGC GTTTTAAAAA AAAAGAGGGA GTATTTCCAG ATTTGCTCGT GATTGATGGT GGTAAAGGTC AGATAAATCA GTCGCTTAGA GTTCTTAAAG AAATAGGCAT TACAGAAATC ACCGTGTTGG GTATAGCGAA AGGGCCTGAA CGTAAGGCAG GGAATGAAAC CTTATTTTTG GCGGGATATG AGAATCCGGT AATGGTAACA TCTGATTCTC CAGCTTTACA TATATTGCAA CATATCCGTG ACGAAGCTCA CCGTTTTGCT ATTGTTAGCC ATCGTAAACG CCGTGCTAAG GGGGGTAAGC TTTCCCTTTT AGAGGGAATA TCTGGATTAG GTCCCAAACG TCGTCGGAAG CTATTGATTC AACTAGGTGG ATTGCAGGAG ATAACACGGG CAGGAGTTGA AGATCTAGCT CAAATAGAGG GAATTAGCTT GGAATTAGCT CAGCGTATTT ATGACGTTTT TCATAGATGA
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Protein sequence | MANFDIDDFL RNLTPCPGVY RMLDAKGKVL YVGKAKNLKR RIKSYFRNSK LAPKIHVLVK QICDIKITVT HTENEALILE SNLIKALQPR YNVLLRDDKS YPYIFLSADD FPRLGFHRGV KQVSGQYFGP YPNIRSVWQT LKLLQRVFPV RQCEDNFYRN RSRPCLQYQI KRCTAPCVGL ISKKDYSQDI QHVVMFLKGR DQQVINELVI RMEEASGQLA FEQAAYYRDR IASLRQIQAR QYISGEKKDI DVLGVALTEK MACVEVFFIR GGHNLGNKTF LPKLEGNLTP EELLSTFIAQ YYLNRETPPI LILSHQPKDM GLLTEVLSKQ AGRKIALIKP VRGPKVQWIK MALANAKINL NQHLAEKSNI TARFKSLQQL LSLANFPQRI ECFDVSHIQG TATVASCVVF DREGPRKADY RRFNITGIIP GDDYGALRQA LMRRFKKKEG VFPDLLVIDG GKGQINQSLR VLKEIGITEI TVLGIAKGPE RKAGNETLFL AGYENPVMVT SDSPALHILQ HIRDEAHRFA IVSHRKRRAK GGKLSLLEGI SGLGPKRRRK LLIQLGGLQE ITRAGVEDLA QIEGISLELA QRIYDVFHR
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