Gene Noc_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1627 
SymbolfumC 
ID3705691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1819235 
End bp1820641 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content51% 
IMG OID637738102 
Productfumarate hydratase 
Protein accessionYP_343631 
Protein GI77165106 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAA CCCAACACAC CAAACGTATT GAAACCGATA GCATGGGCGA AATCGAAGTG 
CCCGCTGATC GCTACTGGGG CGCCCAAACC CAGCGCTCGC TAATCTATTT CTCCATTGGC
CAAGATCTCA TCCCTCAGGA AGTCATAGAA GCCTTCGGGC TCCTCAAAAA GGCTGCCGCC
CTCACCAATG CGGAGCTAGG CAAGTTACCG AAAGAAAAGG CTCAGCTCAT TGCTCGAGCC
GCCACAGAAG TTGCGGACAG CAAGCTCAAC GAGCATTTTC CACTGCGGGT TTGGATGACA
GGAAGCGGCA CCCAAGCCAA CATGAATATC AATGAAGTTA TCGCTAACCG GGCCATTGAG
CTTGCTGGCG GAGTCAAGGG CAGCAAAGAT CCTATCCATC CCAACGATCA CGTTAATCTA
TCCCAATCCT CCAATGACAC TTTTCCCACG GCAATGCACC TTGCCTCGGC CAAAGCCATT
CAAACACGGT TACTTCCTCA GGTGCAAAAG CTGCGCGATG CTCTTCATAG AAAAGCGGAG
GAATTCAAAG AAATCGTTAA AATTGGGCGC ACCCACCTAC AAGACGCCGT TCCCTTAACC
CTAGGGCAAG AGTTCTCCGG CTACGTGGCC CAACTCGATG ACGACCGCAA GCGAATCGAA
ACTGCTCTGC CTGGACTCTA CGAACTAGCT ATCGGTGGAA CCGCTGTAGG CACCGGCCTA
AATGCACCAC CTCAATTTTC TGAACGGGTG AGCGCTTATC TCAGTAAGTT TACGGGACTT
CCTTTTATTC CCGCATCCAA TAAGTTTGCC GCTCTCGCGG CCCATGATGG AATGGTAATG
GCCAGCGGAA CGCTACGGGT ACTGGCCTGC TCTCTCATGA AAATAGCTAA TGATATTAGA
TGGTTAGGAT CGGGTCCTCG CTGTGGATTG GGTGAACTGC TCTTACCGGC CAACGAGCCT
GGTTCTTCCA TCATGCCTGG AAAAGTCAAC CCCACCCAGT GCGAAGCCAT GACCATGGTC
GCCGCGCAAG TCATGGGCAA TGATACCGCC ATCGGGATCG CCGGCTCCCA GGGCAATTTT
GAACTTAACG TGTTTAAACC AATGCTAGTC TTCAACCTGC TTCATTCAGT AACACTGCTA
GCGGACAGTT GCCATAACTT TACCTGCTTT TTGGTAGAAG GGCTCCAAGC AAACCGAGGC
CAGATTGCAC ATTATGTAGA GCGATCTCTC ATGCTAGTGA CAGCCTTAAC TCCAGAAATC
GGCTATGACC AAGCAGCAAA AGTTGCCCAT TATGCTCTGG AAAATGACAT TTCCCTCAAA
CAAGCCTGCT TGGAACTAAA AGTGCTATCG GCCAAGAAAT TTGACGCTAC TGTACAGCCA
GCCAAGCTAG CCCATCCCTT TAAGTAA
 
Protein sequence
MNTTQHTKRI ETDSMGEIEV PADRYWGAQT QRSLIYFSIG QDLIPQEVIE AFGLLKKAAA 
LTNAELGKLP KEKAQLIARA ATEVADSKLN EHFPLRVWMT GSGTQANMNI NEVIANRAIE
LAGGVKGSKD PIHPNDHVNL SQSSNDTFPT AMHLASAKAI QTRLLPQVQK LRDALHRKAE
EFKEIVKIGR THLQDAVPLT LGQEFSGYVA QLDDDRKRIE TALPGLYELA IGGTAVGTGL
NAPPQFSERV SAYLSKFTGL PFIPASNKFA ALAAHDGMVM ASGTLRVLAC SLMKIANDIR
WLGSGPRCGL GELLLPANEP GSSIMPGKVN PTQCEAMTMV AAQVMGNDTA IGIAGSQGNF
ELNVFKPMLV FNLLHSVTLL ADSCHNFTCF LVEGLQANRG QIAHYVERSL MLVTALTPEI
GYDQAAKVAH YALENDISLK QACLELKVLS AKKFDATVQP AKLAHPFK