Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1627 |
Symbol | fumC |
ID | 3705691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1819235 |
End bp | 1820641 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738102 |
Product | fumarate hydratase |
Protein accession | YP_343631 |
Protein GI | 77165106 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAA CCCAACACAC CAAACGTATT GAAACCGATA GCATGGGCGA AATCGAAGTG CCCGCTGATC GCTACTGGGG CGCCCAAACC CAGCGCTCGC TAATCTATTT CTCCATTGGC CAAGATCTCA TCCCTCAGGA AGTCATAGAA GCCTTCGGGC TCCTCAAAAA GGCTGCCGCC CTCACCAATG CGGAGCTAGG CAAGTTACCG AAAGAAAAGG CTCAGCTCAT TGCTCGAGCC GCCACAGAAG TTGCGGACAG CAAGCTCAAC GAGCATTTTC CACTGCGGGT TTGGATGACA GGAAGCGGCA CCCAAGCCAA CATGAATATC AATGAAGTTA TCGCTAACCG GGCCATTGAG CTTGCTGGCG GAGTCAAGGG CAGCAAAGAT CCTATCCATC CCAACGATCA CGTTAATCTA TCCCAATCCT CCAATGACAC TTTTCCCACG GCAATGCACC TTGCCTCGGC CAAAGCCATT CAAACACGGT TACTTCCTCA GGTGCAAAAG CTGCGCGATG CTCTTCATAG AAAAGCGGAG GAATTCAAAG AAATCGTTAA AATTGGGCGC ACCCACCTAC AAGACGCCGT TCCCTTAACC CTAGGGCAAG AGTTCTCCGG CTACGTGGCC CAACTCGATG ACGACCGCAA GCGAATCGAA ACTGCTCTGC CTGGACTCTA CGAACTAGCT ATCGGTGGAA CCGCTGTAGG CACCGGCCTA AATGCACCAC CTCAATTTTC TGAACGGGTG AGCGCTTATC TCAGTAAGTT TACGGGACTT CCTTTTATTC CCGCATCCAA TAAGTTTGCC GCTCTCGCGG CCCATGATGG AATGGTAATG GCCAGCGGAA CGCTACGGGT ACTGGCCTGC TCTCTCATGA AAATAGCTAA TGATATTAGA TGGTTAGGAT CGGGTCCTCG CTGTGGATTG GGTGAACTGC TCTTACCGGC CAACGAGCCT GGTTCTTCCA TCATGCCTGG AAAAGTCAAC CCCACCCAGT GCGAAGCCAT GACCATGGTC GCCGCGCAAG TCATGGGCAA TGATACCGCC ATCGGGATCG CCGGCTCCCA GGGCAATTTT GAACTTAACG TGTTTAAACC AATGCTAGTC TTCAACCTGC TTCATTCAGT AACACTGCTA GCGGACAGTT GCCATAACTT TACCTGCTTT TTGGTAGAAG GGCTCCAAGC AAACCGAGGC CAGATTGCAC ATTATGTAGA GCGATCTCTC ATGCTAGTGA CAGCCTTAAC TCCAGAAATC GGCTATGACC AAGCAGCAAA AGTTGCCCAT TATGCTCTGG AAAATGACAT TTCCCTCAAA CAAGCCTGCT TGGAACTAAA AGTGCTATCG GCCAAGAAAT TTGACGCTAC TGTACAGCCA GCCAAGCTAG CCCATCCCTT TAAGTAA
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Protein sequence | MNTTQHTKRI ETDSMGEIEV PADRYWGAQT QRSLIYFSIG QDLIPQEVIE AFGLLKKAAA LTNAELGKLP KEKAQLIARA ATEVADSKLN EHFPLRVWMT GSGTQANMNI NEVIANRAIE LAGGVKGSKD PIHPNDHVNL SQSSNDTFPT AMHLASAKAI QTRLLPQVQK LRDALHRKAE EFKEIVKIGR THLQDAVPLT LGQEFSGYVA QLDDDRKRIE TALPGLYELA IGGTAVGTGL NAPPQFSERV SAYLSKFTGL PFIPASNKFA ALAAHDGMVM ASGTLRVLAC SLMKIANDIR WLGSGPRCGL GELLLPANEP GSSIMPGKVN PTQCEAMTMV AAQVMGNDTA IGIAGSQGNF ELNVFKPMLV FNLLHSVTLL ADSCHNFTCF LVEGLQANRG QIAHYVERSL MLVTALTPEI GYDQAAKVAH YALENDISLK QACLELKVLS AKKFDATVQP AKLAHPFK
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