| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1603 |
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| Symbol | gltD |
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| ID | 3705726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1785513 |
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| End bp | 1786955 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637738079 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_343608 |
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| Protein GI | 77165083 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.879773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAC CCACTGGATT TATGGAAATT CCCCGCCGCG ATCGGACCGA GGCGCCGGTC
GCGGATCGGG TACAACATTT CCGAGAATTT GCCATTCCCC TCAGCGAAGG GGAAGTGAGG
GAGCAAGGGG CCCGCTGCAT GGATTGCGGT ATCCCTTTTT GCCACCCCGC CTGTCCCGTT
AATAACATTA TCCCCGACTG GAACGATCTG GTGTACCGGG ATGATTGGCG CCGCGCCCTG
GAAGTGCTCC AGTCCACCAA CAATTTCCCG GAGTTCACGG GCCGCATCTG CCCTGCACCT
TGCGAAGCAG CCTGTACTCT CAATCTGACC GACGAGCCAG TCACCATTAA AACCATCGAA
TGCGCTATTA TCGACAAGGG CTGGCAAGAA GGCTGGATCA GGCCGCAAAT ACCCACCCAT
AAAACGGGAA AGCGGGTAGC CGTGGTCGGC TCGGGTCCGG CGGGACTTGC CTGCGCCCAA
CAATTGGCCC GGGTGGGTCA CCAAGTCGAA GTCTTTGAAA AAAACGACCG GATCGGTGGC
CTGCTGCGCT ATGGAATCCC GGATTTTAAA ATGGCCAAAT CCCTTATCGA CCGGCGCATG
GCCCAAATGC AGGCGGAAGG CGTGGCCTTT CACCCCAATA GCCATATTGG GGTCAACACA
CCAGCCCGCT CACTGCTGGA AACCTTCGAT GCCCTGGTCC TCACGGGCGG TTCCGAGGAC
CCGCGGGATC TCCCCATTCC AGGACGGGAA CTCAGGGGCG TTCATTTCGC CATGGATTTC
CTGACCCAGC AAAATCGCCG CGGGGCGGGG ATCAGCCTCC CTAACCAAGC GCCTATCAGC
GCCAAGGACA AGCATGTGAT TGTCATCGGT GGCGGCGACA CCGGTTCGGA CTGCATAGGG
ACTTCTTTTC GCCAGGGGGC GCTTGCCGTC ACCCAACTAG AAATCATGCC CCAGCCGCCG
GAAAAGGAAA ATAAACTACT CACTTGGCCC AACTGGCCCT ATAAGCTTCG CACCTCCAGT
TCCCAGGCAG AAGGGGCCTC CCGGGATTGG GCCGTGGCCA CCAAAACCTT CCGGGGCGAA
AACGGGCAAG TCACCGCCCT CCAGCTAGTG CGTCTTAAGT GGCATCAAAA TCAGCAAGGG
CATTGGAAAA TGGAGGAGGT GCCTAACAGC GAATTCGAAC TGCCTGCGGA TTTAGTGCTG
CTGGCTATGG GCTTTGTCCA TCCGGTGCAT GCAGGTCTAT TGGAGGAACT CGGCGTTGCC
CTCGATGGAC GGGGTAACGT GGAAGCCGAC ACTGAACGCT ACCAGACTTC AATCCCGAAG
GTCTTTGCCG CCGGCGATAT GCGCCGCGGT CAATCCCTCG TGGTATGGGC CATTCGCGAA
GGCCGCCAGG CGGCCCAGGC CGTGGATGAA TTTCTCATGG GTTACTCGGA CCTGCCCCGG
TGA
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| Protein sequence | MGKPTGFMEI PRRDRTEAPV ADRVQHFREF AIPLSEGEVR EQGARCMDCG IPFCHPACPV
NNIIPDWNDL VYRDDWRRAL EVLQSTNNFP EFTGRICPAP CEAACTLNLT DEPVTIKTIE
CAIIDKGWQE GWIRPQIPTH KTGKRVAVVG SGPAGLACAQ QLARVGHQVE VFEKNDRIGG
LLRYGIPDFK MAKSLIDRRM AQMQAEGVAF HPNSHIGVNT PARSLLETFD ALVLTGGSED
PRDLPIPGRE LRGVHFAMDF LTQQNRRGAG ISLPNQAPIS AKDKHVIVIG GGDTGSDCIG
TSFRQGALAV TQLEIMPQPP EKENKLLTWP NWPYKLRTSS SQAEGASRDW AVATKTFRGE
NGQVTALQLV RLKWHQNQQG HWKMEEVPNS EFELPADLVL LAMGFVHPVH AGLLEELGVA
LDGRGNVEAD TERYQTSIPK VFAAGDMRRG QSLVVWAIRE GRQAAQAVDE FLMGYSDLPR
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