| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1489 |
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| Symbol | |
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| ID | 3705980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1648088 |
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| End bp | 1650157 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637737976 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_343505 |
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| Protein GI | 77164980 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000345981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTGA TTATATTGAG ATGGGCAAGT CTCTGCTGGG GGATGCTGTT TTTGTTGCCT
TTTTTTAAGG CACAAGCAAT GGACGACGCC GTAGCATTGG AAGCGTTAGT GGTGACGGCT
GATCCCTTGG GCAGAAGCGA GGAGGATATA TTGCAGCCTA CTTCGGTACT GATGGGTAAG
GCGTTATCGA TTAAGGATAA ACGCAATATT GGGGAGGCTG TGGCTGGGGA ACTCGGGGTG
ACTTCCAGCG ACTTTGGCCC TGCGGTAGGC CGTCCAATTA TCCGGGGTTT GGGCGGAACC
CGCGTTCGCG TATTAGAAGA CGGCATTGGG GCCATGGATG TTTCCGCTAT CAGTCCGGAC
CATGCGGTGG CTGTCCAACC TTTCTTTGCG GATCAGATTG AAATTTTCAA GGGGCCGGCT
ACTTTACTAT ACGGCAGTGG TGCTATTGGG GGAGTGGTTA ATATTGTCGA CCACCGAATT
CTCGATTATG TCCCCGAAGC CATTGAGGGG GATGTGTACG GCCATTATGA TTCGGTTGCT
GATGACGCTA CCGGCGTTTT TCGCTTTAAT GCCGGTGCAG GCGATTTTGC ATTTCACCTG
GCTGGCCTTT TGCGGGATAC GGAGGATTAT GGTATTCCGG GATTTGCCCA GGTTAATCCT
GAGCCGGGCG CGAAAAGTGG AACACTTGCA AACAGCGATG TCCACACCAA GAATTTTACC
GGTGGTTTAT CTCTCGTTCG TGATGAGGGA TTTTTAGGGC TTGCCGTGAG TCGCCTCACC
AATGAATATG GTGTCCCTGG TGAGCATGGG CATGAAGATG AAGCAGGGCA GGCGCACGAA
GAGGGCGGAG TCCGTATTGA TCAAGCCCAG ACCCGTCTTG ATATTAAAGG GACCTTATAC
TTACCTTTAG CGGGAATCCA AACCATTAAA ACCCGATGGG GCCATAATGA TCATACCCAT
CAGGAATTTG AGCCCTCTGG GCTGGCTAGC ACGATTTTAA ATAACAAAGA GTGGGAGGGT
CGGGTTGAAT TTCTTCATAC TCCTTTTGGA GAGTGGGAGG GGGTCGCTGG ATTGCAATAC
CGCAACCGGG ACCTTTCCGC TAGAGGAGAG GAGGCTTTCA TGCCTCCCTC CTCGCGGATG
GATTCTATAA GTGTCTTTAT TTTAGAAGAG CGTGCTTGGC GACGCTGGCA TTTCGAGATG
GGGGGGCGAT TTGAGCATCA GGTAGCTAAG AAATCAGAGG GTGGCCCGCA CGCGAGCCAT
AATCTATTCA GTATCTCTGG CGGAGCCATG TGGGATTTCT GGAAAGACTA TGCTGTCGGC
TTCAATGTTT CCCATTCCGA GCGGGCCCCC GCGTTGGAAG AGCTATTTTC AGAAGGTCCC
CACCTGGCTA CCAATACGTT TGAAATTGGC AATCCTTTCC TGAACAAGGA AATCTCCAAT
AATTTGGATC TATCCTTGCG TAAGACTCGT TCACATTGGC ATTGGAAGTT GAATCTTTTC
GCTAATTTCA TCAGCGATTT CATTTTCTTA CAAGAGCAGG ATAAAAATGG CGATGGGATC
GCTGATCGGG TTAATTTGGA GGGGGAACCG TCCATGGACC CGGATGGGCT TTTGTTGGTA
AACGAAAAAC AAGCGGATGC TGAATTTTTT GGAGTAGAAT TCGAAACAGT AATAGGTCTA
TTTGAGGATC ATCGCGGCAA GCTGGATCTT CGTTTATGGA CCGACTATGT CAGGGGTAAA
TTGAAAAATG GCGCTAATTT GCCTCGAATA ACTCCTTTGC GCTTTGGGAG TGAATTGGAT
TATGAGCGAG GGCCAGGGTA TGCGGGCATT AATCTAATGC GGGTTCAAGC CCAAGATGAG
ACGGCAGCGC TAGAGACGGA GACCGGGGGC TATACCCTAT TAAAGGTTTA TATGGGATAT
CGCTTTGCGC TGGGGCCGGT ACAGTATGCT GTTTTCCTGC GGGGGACAAA TCTCTTAAAC
GAGAAAGCTC GGCGCCATAC TTCCTTTTTA AAAAATCAGG CTCCTTTACC AGGCCGTTCA
GCCATGGTGG GAGTAAACGC GACTTTCTAA
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| Protein sequence | MQVIILRWAS LCWGMLFLLP FFKAQAMDDA VALEALVVTA DPLGRSEEDI LQPTSVLMGK
ALSIKDKRNI GEAVAGELGV TSSDFGPAVG RPIIRGLGGT RVRVLEDGIG AMDVSAISPD
HAVAVQPFFA DQIEIFKGPA TLLYGSGAIG GVVNIVDHRI LDYVPEAIEG DVYGHYDSVA
DDATGVFRFN AGAGDFAFHL AGLLRDTEDY GIPGFAQVNP EPGAKSGTLA NSDVHTKNFT
GGLSLVRDEG FLGLAVSRLT NEYGVPGEHG HEDEAGQAHE EGGVRIDQAQ TRLDIKGTLY
LPLAGIQTIK TRWGHNDHTH QEFEPSGLAS TILNNKEWEG RVEFLHTPFG EWEGVAGLQY
RNRDLSARGE EAFMPPSSRM DSISVFILEE RAWRRWHFEM GGRFEHQVAK KSEGGPHASH
NLFSISGGAM WDFWKDYAVG FNVSHSERAP ALEELFSEGP HLATNTFEIG NPFLNKEISN
NLDLSLRKTR SHWHWKLNLF ANFISDFIFL QEQDKNGDGI ADRVNLEGEP SMDPDGLLLV
NEKQADAEFF GVEFETVIGL FEDHRGKLDL RLWTDYVRGK LKNGANLPRI TPLRFGSELD
YERGPGYAGI NLMRVQAQDE TAALETETGG YTLLKVYMGY RFALGPVQYA VFLRGTNLLN
EKARRHTSFL KNQAPLPGRS AMVGVNATF
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