Gene Noc_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1436 
Symbol 
ID3706044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1592460 
End bp1593587 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content52% 
IMG OID637737926 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_343455 
Protein GI77164930 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCTA TGGCTACATC TAATCTCCTT GAAACTCCCC GATCCGGTCA TCCAAGCCCA 
GAGGATGAAT TTGATTTTTT CCAACAGGCC GCAACGCTCG GTTTTGGCGA TGTCCATTTT
CGCCTCGACT CCACGACCCG TCTCCAAGCC GTGGTGGCCA TTCACAATAC CCGGTTAGGA
CCCGCTTTTG GGGGCTGTCG TTGTATCCCC TATGCCACTA CCAAAACGGC CACTGAAGAC
GCAATGCGGC TAGCCCGGGG AATGAGCTAT AAAAATGCCC TGGCCGGTCT CCCTTATGGG
GGAGGGAAAG CAGTCCTCAT ACGGCCACCC TTGATGAATG ATCGCGTGGC CTATTTCGAA
GTCTTTGGCG AGTTTGTGGA AAGCCTGGGG GGACGCTACA TCACCGCTGT CGATAGCGGT
ACTTCGGTGG CAGATATGGA TTGTGTGGCG CGGCGTACTC TCCACGTACT TTGCACCTCA
AGACAACGGG GAGGCAGCGG CGATCCCTCG CCCTATACCG CCCTTGGCGT TCGCCTTGGC
ATTCAAGCCG CTGTGGCCCA TCGACTGAAG CGCTCCGATG TGGAGGGTAT CCATGTGGCC
ATCCAAGGCG CGGGCCACGT GGGCTATCAT TTGGCTAAAG AACTTCATAA GCTGGGCGCA
CAATTGAGCA TTTGCGATGT TAATGAAAAA GCGGCCCAAC GTTGCGCCGA TGAATTTAAT
GCCTACATAG TGCCGCCGGC AGCAATCTAT GATTTACCTT GCCAGGTATT TGCCCCTTGC
GCGTTGGGCG GCATTATTCA TGATAAAACG CTACCGCGGC TGCAAGCATC AATTATTGCC
GGCTCAGCGA ACAATCAGTT GCTCGAATCC CGACATGGAA AAATTCTTCA GGAACGAGGA
ATACTGTACG CTCCCGATTA TGTCATTAAT GCCGGTGGCG CCATCCATGC CGTAACGGAA
GAAGAATCCG AATTAAAGGC AAAGATAAAC AATATTTACT CTACCCTGAT AGAGATTTTT
CAACGGGCAG ACAGTAGCCG CCAAACCACC AACGAGATTG CGGATCGTAT GGCGGAAGAA
ATTCTTTATG GAAGCCATTC AATCCCCCAA AAAACCCACT ATACTTAA
 
Protein sequence
MTPMATSNLL ETPRSGHPSP EDEFDFFQQA ATLGFGDVHF RLDSTTRLQA VVAIHNTRLG 
PAFGGCRCIP YATTKTATED AMRLARGMSY KNALAGLPYG GGKAVLIRPP LMNDRVAYFE
VFGEFVESLG GRYITAVDSG TSVADMDCVA RRTLHVLCTS RQRGGSGDPS PYTALGVRLG
IQAAVAHRLK RSDVEGIHVA IQGAGHVGYH LAKELHKLGA QLSICDVNEK AAQRCADEFN
AYIVPPAAIY DLPCQVFAPC ALGGIIHDKT LPRLQASIIA GSANNQLLES RHGKILQERG
ILYAPDYVIN AGGAIHAVTE EESELKAKIN NIYSTLIEIF QRADSSRQTT NEIADRMAEE
ILYGSHSIPQ KTHYT