Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1406 |
Symbol | |
ID | 3706053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1558213 |
End bp | 1561461 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637737896 |
Product | cation transport ATPase |
Protein accession | YP_343425 |
Protein GI | 77164900 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG0474] Cation transport ATPase [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.52322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCCGG TTAGGGAGAA TAGTTGGCAT GCCCATACTG CAGAGGCCGT ATTGCAGCGG ATGGGCGTTG AACGGCTGGG GTTGACCCAG CAGGAGGCGG AGCAACGTCT AAAGGAGTAT GGGCCTAACC GACTCACACC GCCTAGGCGA AGAGGGGCCG TGGAACGGTT TTTAACCCAA TTTCATAATG TGCTTATTTA TGTGTTGCTC GCCGCCGCAG TGGTGACTGC CTTACTGGCT CACTGGGTGG ACACCGGGGT TATTTTGGCG GTCGTGGTGC TCAATGCCTT GGTTGGCTTT ATTCAAGAAG GCAAGGCGGA ACGAGCCTTG GAAGCTATCC GTCATCTCCT CTCACCCCAA GCGAACGTGC TGCGCGATGG CCAGCATAGA GTGATCCCCG CCGAATGCTT GGTTCCTGGT GATGTGGTAA TCCTCCAGTC TGGTGATAAG GTGCCCGCGG ATCTTCGCCT TATTCGGGTC AAGAATTTAC AAATTGAGGA AGCCCCCCTA ACGGGGGAAT CCATGCCTGC GGAGAAGGCG CTTGAACCCG TTACTGAAAA TGCATCCGTA GGGGACCGAA CCTGCATGGC CTATTCCGGA ACCTTGGTTA CCTACGGTAC AGGGGAAGGG GTGGTGATAG CCACGGGGGA TCGCACCGAG ATTGGGCGCA TCAGCGCCAT GCTAGGGCAG GTGCAAACTC TGATAACGCC TTTGCTGCGG CAGATAGCTG TGTTTGGTCG CTGGCTGACC GCCGCCATCT TGGGGCTGGC AGCGATTGTG TTTGCCTTTG GGGTAGGGGT CCAAGGCTAT TCTCCCCAGG ACATGTTTCT CGCGGCCGTG GGTCTTGCCG TGGCGGCCAT TCCAGAGGGA CTGCCTGCCA TTATGACCAT TACCTTGGCG ATTGGAGTCC AACGCATGGC GCGCCGCAAT GCCATTATTC GTCACCTTCC GGCAGTGGAA ACGCTGGGCT CCGTTAATGT GATTTGTTCT GATAAAACTG GCACCTTGAC CCGGAACGAG ATGACGGTGC GCACGGTAGC CACCGCCGAT ACCTTATTCG AGGTCAGCGG AGTGGGATAT CACCCCCATG GGGGATTTAG CCGGCAAGGC CAACTGATCT CAGTGGATGA CTATCCTGAG TTGGGAAATC TCTGCCGTGC GGGTCTGCTG TGTAATGATG CAAATCTTCA CAAGTGGGAA GAGCAGTGGA TTTGCCAAGG AGATCCCACT GAAGCCGCTT TGGTGAGCTT GGCCATGAAG GCGAATTTGA TTCCGGAATT GGAACGGGAA GAATGGCGAC GAGTCGATGT TATTCCCTTT GAGTCGGCAC TTCGTTTCAT GGCAACTTTG CACCAGGATC AGGCGGGGCA CGGCTTTATT TATCTTAAAG GGGCGCCTGA ACAGGTTTTG GAAATGTGCT ATTGCCAGCG CAGCCAAGGT GAGGATCGAC CCTTGGATAT AGCTTATTGG CATGGACGTA TTCTGGAGAT GGCAGGCAGG GGTGAGCGGG TATTGGCTGT CGCTTTCCGA ATTAGCGATA TTAGCCGCTG CGATCTGCGT TTTGTGGATG TGCGGGGAGA GTTAACCCTG CTAGGGTTAT TTGGAATTAT CGATCCCCCC CGGGTGGAGG CGATTGCTGC GGTCAAGGCA TGCCAGGAAG CAGGAATCCA GGTCAAGATG ATTACCGGAG ATCATCTTTT GACCGCCCAG ACCATTGGTC AGCAATTAGG TCTCAAACAG GGCAGACAAG CATTGGCCGG TGCCGATCTG GAAATCATGG ATGATGAGAC CCTGCGTAAG CTGGTTTTGG ATGTGGATAT CTTCGCGCGG GCTAGCCCAG AACATAAGCT CCGTTTGGTC AAGGCTTTGC AGGCTCAAGG ACGAGTCGTG GCTATGACGG GTGATGGAGT CAACGATGCA CCCGCCTTGA AACGGGCCGA TGTGGGTATT GCCATGGGAC AGAAGGGCAC GGAGGTGGCT AAAGAGGCCG CCGAAGCCGT GCTTACCGAC GATGATTTTG CTTCCATTGC CCAAGCGGTA AAGGAAGGAC GTACCGTTTA TGACAATCTA AAGAAATCCA TACTTTTTAT TTTGCCCACC AATGGGGGCG AAGCGATGAC CTTGTTGGTT GCCATTTTGC TTGGCTATAT GCTCCCCATT ACCCCGGTGC AGATTCTATG GATTAACATG ATCACGGCGG TTACCCTGGC CTTGGCGCTG GCTTTTGAGC CTCCAGAAGG GAATGTCATG CGCCGTCCTC CCCGTGATCC GGGGGAACCG GTACTATCCG GGTTTTTAAT TTGGCGTATT GTTTTCGTCT CGGCTATTTT GGTAGCCGGT ACTTTTGGGC TCTTTCTTTG GTACCGGGAA CAAGGCGCAT CTATTGAATA TGCTCGGACT ATTGCCGTGA ATACCATGGT AATGTTTGAG ATATTCTACC TTTTCAGTAC CCGCTATATA ACTCGTTCAG CCTTATCCCG AGAGGGTCTA CTGGGTAACC GCTACGTTTT GATAGCTATT ACCATCGTGA CGGTTTTCCA ATTGCTGTTT ACCTATAGCG CACCGATGCA GCAGCTTTTT ACCACCGTGG CTTTAGGGCT CAGGGATTGG GGTTGGATTA TACTCGTTAC TTCTTCTGTA TTTGTGTTAG TGGAACTGGA AAAACTATTT TTGAGGCAAA GGGAAGAAAA AGCCCCGCCC CTAGTGACTA AACCAACTGT GGCGGCACTT GAGCGGTTTA AGCCCCGGGG AGTCTGGCTA GCAGCGCTTG TTCTTCTGCT GCTTGGCGTC GGGGTAGGCC GTTGGGTATG GGTTCAGTTC GATAGGGAGG GAGAAGAAGT CCTGGTCGTG ACAGAAGCAG AAAAACAGGC GCCTCAACCT GCCGAGCCTC TGTTAGACAC TCAGACTCCG AAGGTAAAAA CGCCTCCTGG CAGGGAGCCG GCGTCTGCCT CTCAGCAGCC TGAAGTGGCG GCGATACCGT TGCTGGAGGA AAGCAAGGAA GAACCGGAAA GGCCCAAAAT GGCCTCTAAG CCTCCCACCC AGGAAGAATT GGAACAGGCC AAAGTGCCCC CGGCGGCAAA AACAGCGATT GTCCAGCCAG GCGATAGCTT ATCCCTGATC GCTGCACGAA CCTACGGCGA TCCCCAGCAA TGGCTGCTTA TCTATAAAGC CAATCGGGGC AAGATCAAGG ACCCTAACAT CATCGTTCCA GGCATGGAGT TGATTCTCCC CCCAGTGCCT AAAAATTAG
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Protein sequence | MEPVRENSWH AHTAEAVLQR MGVERLGLTQ QEAEQRLKEY GPNRLTPPRR RGAVERFLTQ FHNVLIYVLL AAAVVTALLA HWVDTGVILA VVVLNALVGF IQEGKAERAL EAIRHLLSPQ ANVLRDGQHR VIPAECLVPG DVVILQSGDK VPADLRLIRV KNLQIEEAPL TGESMPAEKA LEPVTENASV GDRTCMAYSG TLVTYGTGEG VVIATGDRTE IGRISAMLGQ VQTLITPLLR QIAVFGRWLT AAILGLAAIV FAFGVGVQGY SPQDMFLAAV GLAVAAIPEG LPAIMTITLA IGVQRMARRN AIIRHLPAVE TLGSVNVICS DKTGTLTRNE MTVRTVATAD TLFEVSGVGY HPHGGFSRQG QLISVDDYPE LGNLCRAGLL CNDANLHKWE EQWICQGDPT EAALVSLAMK ANLIPELERE EWRRVDVIPF ESALRFMATL HQDQAGHGFI YLKGAPEQVL EMCYCQRSQG EDRPLDIAYW HGRILEMAGR GERVLAVAFR ISDISRCDLR FVDVRGELTL LGLFGIIDPP RVEAIAAVKA CQEAGIQVKM ITGDHLLTAQ TIGQQLGLKQ GRQALAGADL EIMDDETLRK LVLDVDIFAR ASPEHKLRLV KALQAQGRVV AMTGDGVNDA PALKRADVGI AMGQKGTEVA KEAAEAVLTD DDFASIAQAV KEGRTVYDNL KKSILFILPT NGGEAMTLLV AILLGYMLPI TPVQILWINM ITAVTLALAL AFEPPEGNVM RRPPRDPGEP VLSGFLIWRI VFVSAILVAG TFGLFLWYRE QGASIEYART IAVNTMVMFE IFYLFSTRYI TRSALSREGL LGNRYVLIAI TIVTVFQLLF TYSAPMQQLF TTVALGLRDW GWIILVTSSV FVLVELEKLF LRQREEKAPP LVTKPTVAAL ERFKPRGVWL AALVLLLLGV GVGRWVWVQF DREGEEVLVV TEAEKQAPQP AEPLLDTQTP KVKTPPGREP ASASQQPEVA AIPLLEESKE EPERPKMASK PPTQEELEQA KVPPAAKTAI VQPGDSLSLI AARTYGDPQQ WLLIYKANRG KIKDPNIIVP GMELILPPVP KN
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