Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1364 |
Symbol | |
ID | 3706128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1510384 |
End bp | 1512306 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637737859 |
Product | helicase c2 |
Protein accession | YP_343388 |
Protein GI | 77164863 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATACG CTTTATTTTC TGCGGCTGAG CTTCTAGGCG AAGACGGTCC TTTAGCCCGC CAAATTGAAG GATTTACCCC GCGCCGCCCG CAACAGGAGA TGGCGGAAGT GGTTGCTAAG GCTTTAGAAG GAAAACAAAC TTTAGTGACT GAAGCGGGTA CAGGCACGGG CAAAACCTAC GCTTATTTGG TACCAGCATT ATTGTCAGGG ATCAAAGTTA TCATTTCCAC GGGGACTAAG CATCTCCAGG ATCAGCTTTA CCATCGGGAT TTACCCTTGG TGAAAAATGC CTTGGGTATT TCCTCCCGGG TGGCCCTGCT TAAAGGGCGG AGTAATTATC TTTGCCTCCA TCGTTTACAT TTGTTTACCC AGGAAGGGGA AGCGAGTCAT GGCCGTTTGG CTGGGGATCT GGTAAAGGCG CAACTGTGGG CGCGCCAGAC TTCCACTGGC GATATTAGCG AATTGGGTGG AGTCGCTGAT GATTCCCCCG TGTGGCCCCG AATTACTTCC ACAGCGGATA ACTGTTTTGG GCAAGGATGT CCCTCCTTCT CGAAATGTCA TTTGATGGCG GCCCGGCGCC AGGCCCAGGA AGCCGATATC CTGGTGATTA ATCATCACTT GTTATTATCG GATATGGCGC TACAGGAGGA AGGTCATGGC GATCTGCTGC CGCCAGCCAA GGCGTATATT TTGGATGAGG CTCATCAGCT TCCTGAAACC GCCTCCCGCT TTTTTGGGCG CCGTGTAAGT GGTCGCCAAT TGCTAGAGTT GGCCCGTGAC AGTGGAGCGG AGCAACGCAA TGACGCCCCT GATATGTTAG CTATCCGTGA TGCTTGCCAG TGGCTGGAGA AGACGGTAGC CGATTTCCGC TTGGCCTTGG GTCTCGGAGA GCGCCGCTTG GCTTGGCGGA AGGTTGCGGA TATGCCGCCA GTAGCCCTAG CGCTAGAGCA ACTAAGTAGG GCCTTGGCGG ATTTGGAAGT AGAACTTGAG CCGGCGGCGG TGCGGGGCAA GGGTTTGGAA CATTGTTTTA AGCGCTGCGG GAGTTTGCGG GAGCAGCTTG CGATGTTTGC TGAAGAGGCA AGCGAAGATT TTGTTTATTG GTTCGAAGCC TACAGTCGAT CCTTTATTTT AAGCGCGAGT CCCTTGGAAA TCAGTGAAAA CTTTCAGGCT TACATGGAAT GTCGGCCGGG TGCTTGGATA TTCACTTCGG CCACCATGGC GGTAGGGGAG CACTTTGATC ATTTCAATCA TCAGCTAGGT TTAGAAATGC CTGCCAGCTA TCGTTGGGAA AGTCCCTTTG ATTTCCAGCG GCAAGCCCTT TTGTATCAGC CTGTTGGGCT TCCTGAACCT CATGATTCCG GTTATACCCA GGCAGTGATC GAAGAATCCC TGCCGGTGCT TGAAGCTAGC CGCGGCCGCG CCTTTTTGCT GTTTACCAGT CATCGGGCGC TGAAGGAAGC CTATAGCTTG CTCAAGGATC GAATAGCTTT TCCTTTATTA GTCCAAGGTA GCGCACCGCG CAGTGAGTTG TTGCGCCGCT TCCGCGCTTT GGGTAATGGT GTATTGTTAG GTACGAGTAG CTTTTGGGAG GGCGTGGATG TCCGCGGCGA GGCTTTGTCC TGTGTCATTA TTGATAAACT GCCTTTTGCT TCCCCAGGTG AACCGCTGCT GCAAGCCAGA ATTGAGGCCA TCCGTCGTCA GGGCGGTAAC CCTTTTATGG ACTATCAACT TCCCAATGCT GTCATTCAGC TTAAGCAAGG CGTGGGACGG CTGATTCGCG ATGTGCATGA TCGAGGCGTA TTGATGCTCT GTGATCCCCG CCTTCGCAGT AAATCCTATG GTCGTTTGTT CCTGAAGAGC CTGCCAAGCA TAGCCCAAAG CCAGGATATT AAAGAGGTGG AAGCCTTTTT CCAGACTGGA TGA
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Protein sequence | MEYALFSAAE LLGEDGPLAR QIEGFTPRRP QQEMAEVVAK ALEGKQTLVT EAGTGTGKTY AYLVPALLSG IKVIISTGTK HLQDQLYHRD LPLVKNALGI SSRVALLKGR SNYLCLHRLH LFTQEGEASH GRLAGDLVKA QLWARQTSTG DISELGGVAD DSPVWPRITS TADNCFGQGC PSFSKCHLMA ARRQAQEADI LVINHHLLLS DMALQEEGHG DLLPPAKAYI LDEAHQLPET ASRFFGRRVS GRQLLELARD SGAEQRNDAP DMLAIRDACQ WLEKTVADFR LALGLGERRL AWRKVADMPP VALALEQLSR ALADLEVELE PAAVRGKGLE HCFKRCGSLR EQLAMFAEEA SEDFVYWFEA YSRSFILSAS PLEISENFQA YMECRPGAWI FTSATMAVGE HFDHFNHQLG LEMPASYRWE SPFDFQRQAL LYQPVGLPEP HDSGYTQAVI EESLPVLEAS RGRAFLLFTS HRALKEAYSL LKDRIAFPLL VQGSAPRSEL LRRFRALGNG VLLGTSSFWE GVDVRGEALS CVIIDKLPFA SPGEPLLQAR IEAIRRQGGN PFMDYQLPNA VIQLKQGVGR LIRDVHDRGV LMLCDPRLRS KSYGRLFLKS LPSIAQSQDI KEVEAFFQTG
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