Gene Noc_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1364 
Symbol 
ID3706128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1510384 
End bp1512306 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content53% 
IMG OID637737859 
Producthelicase c2 
Protein accessionYP_343388 
Protein GI77164863 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACG CTTTATTTTC TGCGGCTGAG CTTCTAGGCG AAGACGGTCC TTTAGCCCGC 
CAAATTGAAG GATTTACCCC GCGCCGCCCG CAACAGGAGA TGGCGGAAGT GGTTGCTAAG
GCTTTAGAAG GAAAACAAAC TTTAGTGACT GAAGCGGGTA CAGGCACGGG CAAAACCTAC
GCTTATTTGG TACCAGCATT ATTGTCAGGG ATCAAAGTTA TCATTTCCAC GGGGACTAAG
CATCTCCAGG ATCAGCTTTA CCATCGGGAT TTACCCTTGG TGAAAAATGC CTTGGGTATT
TCCTCCCGGG TGGCCCTGCT TAAAGGGCGG AGTAATTATC TTTGCCTCCA TCGTTTACAT
TTGTTTACCC AGGAAGGGGA AGCGAGTCAT GGCCGTTTGG CTGGGGATCT GGTAAAGGCG
CAACTGTGGG CGCGCCAGAC TTCCACTGGC GATATTAGCG AATTGGGTGG AGTCGCTGAT
GATTCCCCCG TGTGGCCCCG AATTACTTCC ACAGCGGATA ACTGTTTTGG GCAAGGATGT
CCCTCCTTCT CGAAATGTCA TTTGATGGCG GCCCGGCGCC AGGCCCAGGA AGCCGATATC
CTGGTGATTA ATCATCACTT GTTATTATCG GATATGGCGC TACAGGAGGA AGGTCATGGC
GATCTGCTGC CGCCAGCCAA GGCGTATATT TTGGATGAGG CTCATCAGCT TCCTGAAACC
GCCTCCCGCT TTTTTGGGCG CCGTGTAAGT GGTCGCCAAT TGCTAGAGTT GGCCCGTGAC
AGTGGAGCGG AGCAACGCAA TGACGCCCCT GATATGTTAG CTATCCGTGA TGCTTGCCAG
TGGCTGGAGA AGACGGTAGC CGATTTCCGC TTGGCCTTGG GTCTCGGAGA GCGCCGCTTG
GCTTGGCGGA AGGTTGCGGA TATGCCGCCA GTAGCCCTAG CGCTAGAGCA ACTAAGTAGG
GCCTTGGCGG ATTTGGAAGT AGAACTTGAG CCGGCGGCGG TGCGGGGCAA GGGTTTGGAA
CATTGTTTTA AGCGCTGCGG GAGTTTGCGG GAGCAGCTTG CGATGTTTGC TGAAGAGGCA
AGCGAAGATT TTGTTTATTG GTTCGAAGCC TACAGTCGAT CCTTTATTTT AAGCGCGAGT
CCCTTGGAAA TCAGTGAAAA CTTTCAGGCT TACATGGAAT GTCGGCCGGG TGCTTGGATA
TTCACTTCGG CCACCATGGC GGTAGGGGAG CACTTTGATC ATTTCAATCA TCAGCTAGGT
TTAGAAATGC CTGCCAGCTA TCGTTGGGAA AGTCCCTTTG ATTTCCAGCG GCAAGCCCTT
TTGTATCAGC CTGTTGGGCT TCCTGAACCT CATGATTCCG GTTATACCCA GGCAGTGATC
GAAGAATCCC TGCCGGTGCT TGAAGCTAGC CGCGGCCGCG CCTTTTTGCT GTTTACCAGT
CATCGGGCGC TGAAGGAAGC CTATAGCTTG CTCAAGGATC GAATAGCTTT TCCTTTATTA
GTCCAAGGTA GCGCACCGCG CAGTGAGTTG TTGCGCCGCT TCCGCGCTTT GGGTAATGGT
GTATTGTTAG GTACGAGTAG CTTTTGGGAG GGCGTGGATG TCCGCGGCGA GGCTTTGTCC
TGTGTCATTA TTGATAAACT GCCTTTTGCT TCCCCAGGTG AACCGCTGCT GCAAGCCAGA
ATTGAGGCCA TCCGTCGTCA GGGCGGTAAC CCTTTTATGG ACTATCAACT TCCCAATGCT
GTCATTCAGC TTAAGCAAGG CGTGGGACGG CTGATTCGCG ATGTGCATGA TCGAGGCGTA
TTGATGCTCT GTGATCCCCG CCTTCGCAGT AAATCCTATG GTCGTTTGTT CCTGAAGAGC
CTGCCAAGCA TAGCCCAAAG CCAGGATATT AAAGAGGTGG AAGCCTTTTT CCAGACTGGA
TGA
 
Protein sequence
MEYALFSAAE LLGEDGPLAR QIEGFTPRRP QQEMAEVVAK ALEGKQTLVT EAGTGTGKTY 
AYLVPALLSG IKVIISTGTK HLQDQLYHRD LPLVKNALGI SSRVALLKGR SNYLCLHRLH
LFTQEGEASH GRLAGDLVKA QLWARQTSTG DISELGGVAD DSPVWPRITS TADNCFGQGC
PSFSKCHLMA ARRQAQEADI LVINHHLLLS DMALQEEGHG DLLPPAKAYI LDEAHQLPET
ASRFFGRRVS GRQLLELARD SGAEQRNDAP DMLAIRDACQ WLEKTVADFR LALGLGERRL
AWRKVADMPP VALALEQLSR ALADLEVELE PAAVRGKGLE HCFKRCGSLR EQLAMFAEEA
SEDFVYWFEA YSRSFILSAS PLEISENFQA YMECRPGAWI FTSATMAVGE HFDHFNHQLG
LEMPASYRWE SPFDFQRQAL LYQPVGLPEP HDSGYTQAVI EESLPVLEAS RGRAFLLFTS
HRALKEAYSL LKDRIAFPLL VQGSAPRSEL LRRFRALGNG VLLGTSSFWE GVDVRGEALS
CVIIDKLPFA SPGEPLLQAR IEAIRRQGGN PFMDYQLPNA VIQLKQGVGR LIRDVHDRGV
LMLCDPRLRS KSYGRLFLKS LPSIAQSQDI KEVEAFFQTG