Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1272 |
Symbol | |
ID | 3706345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1407809 |
End bp | 1410361 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637737774 |
Product | hypothetical protein |
Protein accession | YP_343303 |
Protein GI | 77164778 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCAG TATTGTGGCG GGCTAATTGG CGAAGCTTAA GACGGCATCC CTGGCAAATC GCCTTGGCGC TGCTAGGTAT TGCACTCGGG GTTGCCGTGG TAGTGGCCAT TGACCTTGCT AACAGTAGCG CCAATCGGGC TTTTACCGTT GCCACGGAAA GCGTGACGGG CCGAGCTACT CACCGGATTA TAGGCGGACC CGATGGGTTA CCGGAGGAGA TTTATCTCCG TTTGCGCTTG AATCATGGGA TATTCCCTTC CGCCCCCGTT GTGGAAGGCA GTATTTACCT GCCTGATAAC AATGACCAAC CCTTGCGACT GCTGGGCATC GATCCCTTTG CTGAACCACC CTTCCGGGAT TATTCTAGTG GCACAGGCAC CGACCCCAAG GTGGATATTC CAGCCCTCTT AACCAAACCT GGCGCGGTAA TTCTGGAACA GGCAACCGCC CAACGGTTAG GTCTGCAGCA AGGTGATCAG TTTGCAATTC GGGTGGGTGC TCACCATGCC CAATTAACAG TGACTAGCAC TTTCCAAGGA GAGGGCCTCG CCCAAGAAGG GCTTGCTAAT GTACTTATCG CCGATATCGC AACGGCTCAG GAAACACTGG GCCTGCTTGG TAAGCTCAGC CATATTGATC TGATCTTACC TACCGGTGAG GCGGGCGTTG CTCAGCAGGA ACAACTAAAA AAACACCTGC CCCCCGAAAC CGAGCTTATC GAAGCGGACG CCCGCAGCCG GGCAGTGACC GAAATGACCC ACGCCTTTCA GCTCAATCTC ACTGCGCTCA GCTTTCTAGC GCTCCTAATA GGCAGTTTTA TCGTTTACAA CACCGTCACT TTTCTCTGGC TGCAACGGCG CCGCCTAATT GGTTTACTGC GCGCCCTTGG AGTCGCTCGC AAGCAAATAT TTCTACTGCT GCTCGCCGAA GCCCTGGGTT TTGGGGTTGT AGGCTCGGTG GCAGGCGTAT TTCTTGGGAT CGGCCTAGGC GAATTTCTCC TGGGACTGGT CAGTCAAACT TTTAATGATC TTTATTTTGC TGTCCAGGTC CGTGATGTGT CCCCCTCCAT GGAAAGCTTA ACCAAAGGTC TCGTTCTGGG TCTAGGCGCT ACCCTTGCGG CCACCGTGGT TCCCGCCCGG GAAGCGACTC ACACTCCCCC TGGCACCGCC CTTCATCGTT CTTCGTTGGA ACATCAAGCC CGCCGCTGGT CGAAAAGGGC TGCTCTGACG GGAGGGGGCG TATTAATTAC AGGGGTTCTT GTATTACTGC TGCCTAGCAA AAGCATTGGG CTAGGCTTTG TAAGCCTGAC GGCCCTACAG ATAGGATGCG CTTTACTGGT ACCGACTCTG GGCACCCTGC TGCTCATCTT AGCGCAACCT TTGCTACGCC GAAGCTTTGG AATTTTAGGC CAGTTAGCTA CACGCGGTAT TGTAGCTAGC CTCAGCCGAA CCGGCGTGGC TATGGCGGCC CTGACTCTAG CAATCTCCGC TACGGTCGGC ATCGGCATTA TGATTGATAG CTTTCGGCTC TCCGTCAGTC AGTGGCTCAC GACTACCTTA CAGGCCGATC TTTACGTTTC CATACCCGGC GCTAATTCAG ATCCGGCCCA TAGCTCCCTG GATTTGTCCT TAATGGAACG TATCACCGCC ACACCAGGCG TAACAGCTAT CAGCACCACT CGCTGGGTGC GGATTGAAGA CAAAGACGGC CTCACCAATA TGGTAGCTTT TGCGCCCGTC CCCCAAAGCC TCGCCGGTTT TCAATTTACC TCGGGAAATC CAGAAAAAGC ATGGCAAGCG TTTGCCCATG AAGGAGCCGT ACTGGTCTCC GAGCCCTACG CTTACCACCA CCAGCTATCA CCTGGCTCAA GCCTACGCCT ACGCACCGAC CAGGGCCAAC AGTCCTTCCT CGTAGCCGGC GTTTATCTCA GTTACGGCTC GGATCGGGGG GTTGTGACGA TCCACCGTGA CACTTACCAA CGCTATTGGT CCGATGACGG AGTCTCCGGG ATTGGCATTT ATGCCGATCC CGATGTGGAC CTTGAAATCC TGCGCCAAAC CCTGCTAAAA AGAGTAAACA GCAACCAGCA AATACAAATC CGTACCAACC GCTCTATCCG CGAGCTCTCA TTACAAATTT TTGACCGCTC CTTCGCCATC ACGGAGGTAG TACGGCTGCT CGCTGGATTA GTGGCTTTTG CCGGTATTTT TAGCGCTTTA ATGGCTCTCC AATTAGAACG CACGCGGGAA TTCGGTATAC TGCGGGCCAT GGGACTCCTC CCCCGCCAGT TAAGAGGGCT GGTGACGGGA CAAACCGGAC TGATAGGACT GGTCTGCGGC CTGCTGGCGC TACCCCTTGG GTTGCTCTCA GCCCTAGGAT TAATTTATGT GATTAACCGG CGATCTTTCG GCTGGAGTAT GGGATTTACC ATTTCCCCCG AAATTCTTTT GCAAGGAATC CTTCTTGCTG TAACCGCAGC CGTGCTTGCC GGTATTTATC CGGCCTGGCG AATGGCCCAT ACTCCTCCAG CAGAGGGACT AAGAGAAGAA TGA
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Protein sequence | MTPVLWRANW RSLRRHPWQI ALALLGIALG VAVVVAIDLA NSSANRAFTV ATESVTGRAT HRIIGGPDGL PEEIYLRLRL NHGIFPSAPV VEGSIYLPDN NDQPLRLLGI DPFAEPPFRD YSSGTGTDPK VDIPALLTKP GAVILEQATA QRLGLQQGDQ FAIRVGAHHA QLTVTSTFQG EGLAQEGLAN VLIADIATAQ ETLGLLGKLS HIDLILPTGE AGVAQQEQLK KHLPPETELI EADARSRAVT EMTHAFQLNL TALSFLALLI GSFIVYNTVT FLWLQRRRLI GLLRALGVAR KQIFLLLLAE ALGFGVVGSV AGVFLGIGLG EFLLGLVSQT FNDLYFAVQV RDVSPSMESL TKGLVLGLGA TLAATVVPAR EATHTPPGTA LHRSSLEHQA RRWSKRAALT GGGVLITGVL VLLLPSKSIG LGFVSLTALQ IGCALLVPTL GTLLLILAQP LLRRSFGILG QLATRGIVAS LSRTGVAMAA LTLAISATVG IGIMIDSFRL SVSQWLTTTL QADLYVSIPG ANSDPAHSSL DLSLMERITA TPGVTAISTT RWVRIEDKDG LTNMVAFAPV PQSLAGFQFT SGNPEKAWQA FAHEGAVLVS EPYAYHHQLS PGSSLRLRTD QGQQSFLVAG VYLSYGSDRG VVTIHRDTYQ RYWSDDGVSG IGIYADPDVD LEILRQTLLK RVNSNQQIQI RTNRSIRELS LQIFDRSFAI TEVVRLLAGL VAFAGIFSAL MALQLERTRE FGILRAMGLL PRQLRGLVTG QTGLIGLVCG LLALPLGLLS ALGLIYVINR RSFGWSMGFT ISPEILLQGI LLAVTAAVLA GIYPAWRMAH TPPAEGLREE
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