| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1263 |
|---|
| Symbol | |
|---|
| ID | 3706375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1393286 |
|---|
| End bp | 1394362 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637737765 |
|---|
| Product | cytochrome c peroxidase |
|---|
| Protein accession | YP_343294 |
|---|
| Protein GI | 77164769 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TCGCTTTCTG TTTAGTGCTG CTAATAGGAG CTGCTTATGC TGGCTATGTT
CTTGCCGAAA AGGACAGTGA CGAGCTGATG CAGCAGGCCC AGTCCCAATT TAAACCGATT
CCCACCGAGC TGCAGGAGAT AGAGGGAATT ACTCTGACGC CAGAGAGGAT TGAGCTGGGT
AAATGGCTTT ATTTTGATCC TCGTCTCTCC AAAAGCTGGC TAATTAGCTG TAATACTTGC
CATAATCTTG CCCTTGGTGG GGTGGACCTA GAAGAAACCT CTATTGGCCA TGGGTGGGCA
AAGGGACCCC GTAATGCGCC TACGGTACTT AATTCCGTAT TCAATATTGC TCAATTCTGG
GATGGACGGG CGGAAGATCT CCAAGCTCAG GCGAAAGGAC CGGTGCAGGC GGGCGTAGAG
ATGAATAATA CGCCGGAGCG GGTGGAGCAG ACCCTGAAAA GCATCCCGGA ATATGTTCAG
CGCTTTCGGA AGGCCTTCCC CGGTGATTCT AACCCCGTCA CTTTCGATAA TATGGCGGAT
GCTATCGAAG CTTTTGAGGC TACCTTACTG ACTCCTGGAT CTCCTTTTGA TAAATACCTT
AATGGTGATT CTCAGGCACT ATCGAAAGCG CAAAAAAAGG GGCTTAAACT TTTTATGAAT
AAAGGCTGTT CAACTTGCCA CAATGGGATT AATGTGGGCG GGGGAAGCTA CCATCCCTTT
GGTGTCGTAG AAAAACCCGG CAGCAAAATA CTTCCGGAGG CAGACAAGGG GCGGTTTGTG
GTGACGGAGA CAGCCAGCGA TAAGTACGTT TTCAAAGTTC CTTCCTTGCG TAATATAGAG
TTAACCCCTC CCTATTTTCA TTCTGGACAG GTGTGGGATC TAGAACAGGC GGTTGCTATT
ATGGGCTCAT CACAGCTTGG TATAAAACTT AGCCGTAATG AAACCGCCGC TATTGTGACT
TTTTTGAAAA CCCTAACTGG CGAGCAGCCT AGGGTGGAAT ATCCTATTCT TCCACCCCAC
ACTAAAGGAA CTCCACTTCC GGTGACAGGG GTTTCCGGTA ATGTTGCCGG ACATTAA
|
|---|
| Protein sequence | MKKFAFCLVL LIGAAYAGYV LAEKDSDELM QQAQSQFKPI PTELQEIEGI TLTPERIELG
KWLYFDPRLS KSWLISCNTC HNLALGGVDL EETSIGHGWA KGPRNAPTVL NSVFNIAQFW
DGRAEDLQAQ AKGPVQAGVE MNNTPERVEQ TLKSIPEYVQ RFRKAFPGDS NPVTFDNMAD
AIEAFEATLL TPGSPFDKYL NGDSQALSKA QKKGLKLFMN KGCSTCHNGI NVGGGSYHPF
GVVEKPGSKI LPEADKGRFV VTETASDKYV FKVPSLRNIE LTPPYFHSGQ VWDLEQAVAI
MGSSQLGIKL SRNETAAIVT FLKTLTGEQP RVEYPILPPH TKGTPLPVTG VSGNVAGH
|
|---|
| |