Gene Noc_1257 details

Gene Information

• Locus tag: Noc_1257
• ID: 3706369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 1384156
• End bp: 1384725
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637737759
• Product: HNH endonuclease
• Protein accession: YP_343288
• Protein GI: 77164763
• COG category: [V] Defense mechanisms
• COG ID: [COG1403] Restriction endonuclease

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCCTC CTATCCTACG CCTTGATGTT ACAGGGGACC CGACAACCTG GATTCCTTGG 
CAAGAGGCAG CAGCGCTTTA TGTCAAAGAG AAGGTGACAT GGACTGCGGG TAATACTATT 
TACCGAGTCC GGGGGGGAAT TAGCCGATTA ACAGGGCGGC AGTCCCATTT AGATCTAAAT 
TCGATTATCG CTTGTGAGGG TAAGGTTACC CGATATAAAT ATGATCTGGT TCCTCCTCTG 
AATAATCGTG AACTATTCCA TCGAGACCGC TATACTTGCC TCTATTGTAT GGGTACGTTT 
CGGGACAGCC AGCTCACCCG TGATCATGTT GTTCCCCGCT GCCAAGGGGG GGATGATTCC 
TGGACTAACG TAGTGACCGC TTGCCGTAGC TGTAACCAGA GAAAGGATGG GCGCACGCCG 
GAGGAGGCGG AGATGACTCT CCTTGCCGTG CCCTATGTTC CGAACTATGC GGAATGGTTA 
GTACTCAAGA ATCGCCGTAT TCTGGAGGAT CAAATGGAGT TTCTCAAATC CCGCTTTCGC 
CGTCGCGGAG AAGAGCTGTC CTTTTCCTAA 

 

Protein sequence

MIPPILRLDV TGDPTTWIPW QEAAALYVKE KVTWTAGNTI YRVRGGISRL TGRQSHLDLN 
SIIACEGKVT RYKYDLVPPL NNRELFHRDR YTCLYCMGTF RDSQLTRDHV VPRCQGGDDS 
WTNVVTACRS CNQRKDGRTP EEAEMTLLAV PYVPNYAEWL VLKNRRILED QMEFLKSRFR 
RRGEELSFS