Gene Noc_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1219 
Symbol 
ID3706409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1334133 
End bp1334810 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content50% 
IMG OID637737721 
Productpeptidylprolyl isomerase 
Protein accessionYP_343250 
Protein GI77164725 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAG GAGCCATGTT TCTAATTGCT AGCTTCACCC TAGCCCTCCT TGGAGGAACC 
ACCACTGCGG AGGAGCTCGA AACAGATGCC CAGAAACTGA GTTACCTTAT CGGGTATCAA
TTTGGCCAAA ATATGCAGCA GCAACGAATA GAACTGGATA AGCAGGCATT TATGCTTGCC
CTTGAAGATG CGTTGCAACA AGCCCCCTCG CGCCTTTCCC CGGAACAAGC CAAGGCGGCA
ATGAACGCCA TACAACAACA AGAGCAGCAA AAGAGAGCCG AAAGTGGAGA GAAAAATAAA
GCTACAGGAA AAGATTTTCT AAAAACCAAC AAAGAAAAGG AAGGAGTGGT CGAGCTTCCC
AACGGGCTGC AATATCGCAT TCTTGAGCAA GGCGAAGGCG AAAAACCCGC TGCCGAGGAT
ACCGTCGTAG TCAACTACCG GGGCACCCTG GTGGATGGCA CGGTATTCGA CAGTTCCTAT
GAACGAGGGG AACCGGTTAC CTTTAAGGTC AATGGCGTTA TTGAAGGTTG GCAACAGGCG
CTGCAGTTAA TGCCCGTGGG TTCTAAGTGG AAAGTCTTCA TCCCTTCCGA CCTTGCCTAT
GGCGAGCGGG GCGCTGGCCG TCTCATCGGT CCCAATGAAA CGCTCATTTT TGATATTGAA
CTGCTCGAAA TTAAATAA
 
Protein sequence
MPKGAMFLIA SFTLALLGGT TTAEELETDA QKLSYLIGYQ FGQNMQQQRI ELDKQAFMLA 
LEDALQQAPS RLSPEQAKAA MNAIQQQEQQ KRAESGEKNK ATGKDFLKTN KEKEGVVELP
NGLQYRILEQ GEGEKPAAED TVVVNYRGTL VDGTVFDSSY ERGEPVTFKV NGVIEGWQQA
LQLMPVGSKW KVFIPSDLAY GERGAGRLIG PNETLIFDIE LLEIK