Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1218 |
Symbol | |
ID | 3706408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1332553 |
End bp | 1333407 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637737720 |
Product | micrococcal nuclease |
Protein accession | YP_343249 |
Protein GI | 77164724 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.340298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGCTC CGGCCAGGAT GGTGGCTGCC GGTAAACTTT TATTGTTGGG AGTACTCGCT TTATTGGCGC TTGCCCCCTC CGAGGCAGGG GTATTTCGCT GGATAGACTC AGCAGGCCAC ACCCACTATA GCGATCGCCC CCAGCCGGGC GCCCAGGAAT TAAAGCTTAA TAAACTTGCG GCGCCCTATT ACTATGTTCA GCGGGTATAT GATGGAGATA CCCTCCTGCT CAAGGGGGAT ATCCGGGTCA GGTTATTAGG GATCGATACA CCAGAGATTG AGGGCCGTTA CCGGCTGGAG CAAGCAGGGG GCAGCTCGGC CCGGGATTGG TTGCGTCAAC GTATTGAGGG TCAGAAGGTA CGGCTTGAAT TCGACCAAGA GCGGCATGAT CATTATCAAC GCTTGTTAGC CCACGTCTTT ACTGTAGGGG GGGAACACCT TAACCTTCTC TTGGTAGAGG AAGGTTTGGC TGTAGTCAGT ATTTTTCCTC CTAATTTCAA GTATGGTACT CAATTGGCAC GGGCCCAGGA TCGCGCCGAA GCGGACCGAC GGGGGCTTTG GAGCATGCCA GATTATGTGC CCCAGCCGAT TCTAGCGATC CCCCGGGAGG GATACCAGCG AGGTTGGCGG CGTTATCAAG GAACCCCGGT GGCGATCCGT TCAAGCCGCA AGTATGCACG CTTGGTTTTT AGTAAGCAGG TGGAGGTGCG TATTCCCCAA GCGCAATTAG ATCTTTTCGG GAAGCTTGAG CGCTACCTGG AAAAACAACT GGAGGTTCGA GGATGGGTTT CCCGCCGCAA AGAAAATTAT TCTATCCTGG TGCGTCATCC AAGCGGACTC AAGCTGCTTT TTTAA
|
Protein sequence | MNAPARMVAA GKLLLLGVLA LLALAPSEAG VFRWIDSAGH THYSDRPQPG AQELKLNKLA APYYYVQRVY DGDTLLLKGD IRVRLLGIDT PEIEGRYRLE QAGGSSARDW LRQRIEGQKV RLEFDQERHD HYQRLLAHVF TVGGEHLNLL LVEEGLAVVS IFPPNFKYGT QLARAQDRAE ADRRGLWSMP DYVPQPILAI PREGYQRGWR RYQGTPVAIR SSRKYARLVF SKQVEVRIPQ AQLDLFGKLE RYLEKQLEVR GWVSRRKENY SILVRHPSGL KLLF
|
| |