Gene Noc_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1213 
Symbol 
ID3706403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1326641 
End bp1326901 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content52% 
IMG OID637737715 
ProductRNA polymerase, omega subunit 
Protein accessionYP_343244 
Protein GI77164719 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.492791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAC TAACGGTTGA AGATTGCATT GATAATATTG ATAATCGCTT TTTATTGGTT 
TTGGCGGCGG CTAAGCGGGC GCGGCAACTG GCTATGGGGG CCACGCCCAC TGTGCCTTGG
GATAAGGATA AGCCTACAGT TGTCGCCTTG CGCGAAATTG CAGAGGGTCA CATTGATGTA
GGCGTTATGG ATACGGCCAG CGCCCGGGAG CATGCTAAAG AGTCACAGGT AAGCGAAGAA
GAAGTTCGGG AGGAATCCTG A
 
Protein sequence
MARLTVEDCI DNIDNRFLLV LAAAKRARQL AMGATPTVPW DKDKPTVVAL REIAEGHIDV 
GVMDTASARE HAKESQVSEE EVREES