Gene Noc_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1212 
Symbol 
ID3706402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1325912 
End bp1326523 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content53% 
IMG OID637737714 
Productguanylate kinase 
Protein accessionYP_343243 
Protein GI77164718 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGCA GCCTATTTAT CGTTGCAGCT CCCTCTGGCG CTGGGAAAAC CAGTTTGGTC 
AAGGCACTGG CAGCCTCGAT GGCCGATATT CGCCTTTCAA TTTCTCACAC GACCCGCCCT 
CCACGGCCGG GAGAACAAGA TGGAATGGAT TATCATTTTG TTACCGAGGC CATCTTTGAA 
ACCATGGAGG GGGGAGGTGG CTTCTTAGAG CATGCCCAGG TGTTTGGCCA CCGCTACGGC 
ACAGCCAAAG AAAGCGTACT CCCGCTTTTG GCGCAAGGCA TGGATGTTAT TCTCGAGATT 
GATTGGCAGG GAAGACGCCA GGTGCAAGCA CAATTCCCTC ACTGTGTGAG TATCTTTATT 
TTGCCCCCTT CCCGGGAGAC CCTAGAGCAC AGGCTACGCC TCCGGGGACA AGATACGGAA 
GCCGTGGTCG CCCGCCGGAT GGGGGACGCG TGCGCCGAGA TTTCTCACTA TAATGAGTTT 
GATTATCTGG TGGTCAATGA TGACTTTGAG GTAGCACACA CGGATCTGAG GGCTATCGTT 
CAAAGCCGGC GTTTGCTGCG TTTACGGCAA GAGAAAAGGT TAAAATCCCT GTTAGGCGAG 
TTATTAGAGT GA
 
Protein sequence
MSGSLFIVAA PSGAGKTSLV KALAASMADI RLSISHTTRP PRPGEQDGMD YHFVTEAIFE 
TMEGGGGFLE HAQVFGHRYG TAKESVLPLL AQGMDVILEI DWQGRRQVQA QFPHCVSIFI 
LPPSRETLEH RLRLRGQDTE AVVARRMGDA CAEISHYNEF DYLVVNDDFE VAHTDLRAIV 
QSRRLLRLRQ EKRLKSLLGE LLE