| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1206 |
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| Symbol | metH |
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| ID | 3706705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1316055 |
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| End bp | 1319753 |
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| Gene Length | 3699 bp |
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| Protein Length | 1232 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637737708 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_343237 |
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| Protein GI | 77164712 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTAA AATCTCCGCG TATTACTGCC CTTAAGGAGC AACTGATCAA GCGCATTCTA
ATACTAGATG GGGCGCTTGG CACCATGATT CAGAGCTACG GTCTGACCGA AGCAGAATTC
CGGGGAGATC GTTTTGCCGA CTGGTCCTGC GATCTCAAGG GAAATAACGA TCTGCTAGCA
CTCACTCAGC CACAAATTCT CCGGGAAATC CATGGTAATT ACTTGGCGGC GGGTGCGGAT
ATCATCGAGA CCAATACCTT CAACGCTACC CGGATCGCCA TGGCGGATTA CCGGATGGAA
GAGCTAGCGG TGGAAATTAA CCAGACGGCG GCGCAACTAG CCCGGGAAAT GGCGGATGAC
ATGACGGCGA AGACGCCGGA TCGCCCCCGT TTCGTGGCCG GTGTTTTAGG CCCCACCAAC
CGCACCGCTT CCATTTCCCC CGATGTCAAT GATCCTGGGT TTCGCAATAC TTCCTTTGAT
GAGCTAGTAG CTGCCTATAC CGAATCAATC CGGGGACTCA TCCAAGGGGG CACGGATATC
CTGCTGGTGG AAACGATTTT CGATACCCTC AATGCCAAGG CCGCCGTTTA TGCCATTGAG
CAATATTTTG AGGACCATCA GATCCGCTTC CCGGTCATGA TTTCGGGCAC TATTACCGAT
GCTTCCGGGC GGACTCTGTC GGGCCAGACG ACCGAGGCTT TCTGGAATTC CTTGCGCCAC
GCCGAACCCC TGGCTTTTGG CCTGAATTGC GCCCTGGGTC CCAAGCAGTT GCGGCAGTAT
GTGGAAGAGC TTGCCGGTCT AGCGGATACC CATGTGGCGG CCCATCCCAA TGCCGGCTTA
CCCAATGAGT TCGGGGGTTA TGACGAAACC CCGGAGGAAA TGGCCCAGGA AATCGGCGAA
TGGGCGCAAG CGGGCTTTTT AAATATTGTG GGCGGCTGCT GCGGCACCAC CCCCGAGCAT
ATTCGCGCCA TCCGGGAAGC GGTGGAGAAG CACCCCCCGA GAAAAATCCC CCAACGACCG
GTAGCCTGCC GGCTTTCGGG CCTTGAGCCA AGCAACATCG ACGCTGACTC CCTGTTTGTC
AATGTGGGGG AACGTACCAA TATCACCGGC TCGGCCAAGT TCCGCCGTCT CATTAAGGAA
GAGGATTATG AAACGGCCCT GGAGGTAGCG CGGCAACAGG TGGAAAGCGG CGCCCAGATT
ATTGATATCA ACATGGATGA GGGCTTGCTG GACTCCCAAA AAGCCATGGT CCGCTTCCTG
AACTTGATTG CGGTCGAACC GGATATCTCC CGGGTGCCGG TGATGATCGA TTCTTCCAAA
TGGGAAATAA TTGAAGCCGG ACTCAAATGT ATTCAAGGAA AAGGAATCGT CAACTCCATT
TCCTTGAAAG AAGGCGAGGA ACCCTTTCTG CAACAGGCCA AGCAGGTCCG TCGTTATGGC
GCGGCGGCGG TCATCATGGC TTTTGATGAG CAAGGACAGG CAGAGACCAC CGAGCGCAAG
GTTGGGATTT GCGCCCGGGC CTATCAGCTG CTGACCGAGA AAATAGGTTT CCCGGCGGAA
GATATCATTT TTGATCCCAA TATCTTCGCC GTGGCCACGG GCATTGAGGA ACATAACAAC
TATGGGGTGA CCTACATCGA GGCGGCCCGG GAAATCAAAC GGACCTTGCC CCCGGCCTTG
GTTTCCGGCG GCGTGTCCAA TGTCTCCTTC TCCTTCCGGG GCAATGAAAA GGTACGGGAA
GCCATTCATG CTGTGTTCCT CTACCATGCC ATTCAGGCGG GCATGGATAT GGGCATAGTC
AATGCCGGGC AATTGGCGGT TTATGATGAA ATCGACCAGG ATCTGCGGGA ACGGGTGGAA
GATGTCATTC TCAACCGCCA TCCCGAGGCC ACGGAAAGAC TGCTGGAAAT CGCCGAAAAA
TACCGGGGCG CGGGCGGAGA AGCCGCCGAG CGCAAGGAGG ATCTTGCCTG GCGGGAGTTG
CCCGTCAACG AACGCCTCGC CCATGCCCTT GTCAAGGGAA TTATTGATTT TGTGGAAGCC
GACACCGAGG AGGCCCGCTT AGCCGCCAAG CGGCCCCTGG ATGTAATTGA AGGTCCTCTC
ATGGACGGCA TGAACGTGGT GGGGGATTTG TTCGGCTCGG GCAAGATGTT TTTACCCCAG
GTGGTGAAGT CGGCCCGGGT CATGAAAAAA GCCGTCGCCT ACCTGTTGCC CTTTATGGAA
AATGAAAAGG AGTCCTATAA GAGCCACGGC AAGGTGGTGC TAGCCACGGT CAAGGGGGAT
GTCCACGATA TCGGTAAAAA CATTGTCGCC GTGGTATTGC AATGTAACAG CTTCGAGGTC
ATTGACCTGG GTGTCATGGT GCCGGCGGAG AAGATTCTGC AGACGGCCAA GGAGGAGTCC
TGTGACTTTG TGGGCCTGTC CGGGTTGATC ACCCCTTCCC TGGATGAAAT GGTGCATGTG
GCCAAGGAAA TGGAGCGGCA GAATTTTGAT TTACCGTTGC TGATTGGAGG AGCTACCACC
TCTAAAATGC ACACAGCGGT CAGAATTGAA CCCCAATATA GCCAGCCGGT GGTCTATGTC
CCGGACGCCT CCCGGGTGGT GGGCGTAGCC CAGCGCCTGC TTAATCCTAG CCTTAAAGCA
GAATACGCCG CCGAGATCAC GGAGGAATAT GGCCAAATGC GGCGGCGACG GACGGAACAG
CAAACGGAAA GAAGCCATAC GCCCCTGCCC CAAGCCCGGG CCAATAAGCT TAAAACCGAC
TGGACGGCTT ATGTGCCTCC GCGGCCAACT TTCCTGGGCC TTAAGTCCTT TGCGGATTAT
CCCCTGGAAG AGTTGACCGC CCGCATTGAC TGGACGCCTT TCTTCCATGC CTGGGAATTG
GCGGGCAAGT ATCCCAGGAT TTTGAAGGAT GAAGTGGTGG GGGAAGAAGC GCGGAAACTG
CTCAAGGACG CCCAGGCGCT GCTCAAGCAG GTGCTGGAAG AGAAATGGCT GGAGGCGCGG
GCTGTTATCG GATTTTTCCC CGCCAATACG GTCAATGAAG ATGACATCGA GCTGTATACC
GATGAAAGCC GCCAGGAAGT CCTCACGACC TTGCACCATA TTCGCCAGCA AATGGTGCGC
CGCAGCGGTC AACCCAATTA TTGCCTGGCC GATTATGTGG CTCCCAAGGA AACAGGAGTA
GCCGATTATA TCGGTGCCTT CGCGGTTACC GCGGGCCTGG GCATTGATGA GCGGCTGGAA
GAATTTGCCC GGCAGTATGA CGATTACAAT AGCATCCTGC TCAAAGCCAT CGCTGACCGC
CTGGCCGAAG CTTTCGCCGA GTGTATGCAT GAACGGGTCC GCAAGGAGTT CTGGCATTAT
GCCCCGGATG AGGCCCTTAC CAACGAAGAA CTGATTAGCG AAAATTACCG GGGAGTCCGG
CCCGCGCCGG GTTATCCAGC GTGCCCCGAT CATACGGAAA AAGCCACCCT GTGGCAGCTC
ATAGAACCCG ACAAGAATGC TGGCATTATC CTGACCGAAA GCTACGCCAT GGTTCCCACC
GCCGCGGTTT CCGGCTGGTA TTTTCCCCAT CCGGAATCCC GTTATTTCGG CACCGGCAAG
ATTCAAAAGG ACCAGGTGAA GGACTATGCC CGCCGCAAGG GAATCAGCGT GGAGCAGGTG
GAGCGCTGGC TGAGATCTAT TTTGGGGTAT GAAATTTAA
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| Protein sequence | MSVKSPRITA LKEQLIKRIL ILDGALGTMI QSYGLTEAEF RGDRFADWSC DLKGNNDLLA
LTQPQILREI HGNYLAAGAD IIETNTFNAT RIAMADYRME ELAVEINQTA AQLAREMADD
MTAKTPDRPR FVAGVLGPTN RTASISPDVN DPGFRNTSFD ELVAAYTESI RGLIQGGTDI
LLVETIFDTL NAKAAVYAIE QYFEDHQIRF PVMISGTITD ASGRTLSGQT TEAFWNSLRH
AEPLAFGLNC ALGPKQLRQY VEELAGLADT HVAAHPNAGL PNEFGGYDET PEEMAQEIGE
WAQAGFLNIV GGCCGTTPEH IRAIREAVEK HPPRKIPQRP VACRLSGLEP SNIDADSLFV
NVGERTNITG SAKFRRLIKE EDYETALEVA RQQVESGAQI IDINMDEGLL DSQKAMVRFL
NLIAVEPDIS RVPVMIDSSK WEIIEAGLKC IQGKGIVNSI SLKEGEEPFL QQAKQVRRYG
AAAVIMAFDE QGQAETTERK VGICARAYQL LTEKIGFPAE DIIFDPNIFA VATGIEEHNN
YGVTYIEAAR EIKRTLPPAL VSGGVSNVSF SFRGNEKVRE AIHAVFLYHA IQAGMDMGIV
NAGQLAVYDE IDQDLRERVE DVILNRHPEA TERLLEIAEK YRGAGGEAAE RKEDLAWREL
PVNERLAHAL VKGIIDFVEA DTEEARLAAK RPLDVIEGPL MDGMNVVGDL FGSGKMFLPQ
VVKSARVMKK AVAYLLPFME NEKESYKSHG KVVLATVKGD VHDIGKNIVA VVLQCNSFEV
IDLGVMVPAE KILQTAKEES CDFVGLSGLI TPSLDEMVHV AKEMERQNFD LPLLIGGATT
SKMHTAVRIE PQYSQPVVYV PDASRVVGVA QRLLNPSLKA EYAAEITEEY GQMRRRRTEQ
QTERSHTPLP QARANKLKTD WTAYVPPRPT FLGLKSFADY PLEELTARID WTPFFHAWEL
AGKYPRILKD EVVGEEARKL LKDAQALLKQ VLEEKWLEAR AVIGFFPANT VNEDDIELYT
DESRQEVLTT LHHIRQQMVR RSGQPNYCLA DYVAPKETGV ADYIGAFAVT AGLGIDERLE
EFARQYDDYN SILLKAIADR LAEAFAECMH ERVRKEFWHY APDEALTNEE LISENYRGVR
PAPGYPACPD HTEKATLWQL IEPDKNAGII LTESYAMVPT AAVSGWYFPH PESRYFGTGK
IQKDQVKDYA RRKGISVEQV ERWLRSILGY EI
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