Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1180 |
Symbol | dcd |
ID | 3706754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1288562 |
End bp | 1289128 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637737683 |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_343212 |
Protein GI | 77164687 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.150016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTA AATCCGATAA GTGGATTCGT TACATGGCGC AAGCACACGG CATAATAGAG CCCTTCGAGC CGCGTCAGAT CCGGGAAGCC AATAATGCCC GCATTATTTC TTATGGCACT TCAAGTTATG GCTATGATAT TCGGTGTTCT AATGAGTTTA AGATTTTTAC CAATATCAAC TCGGCTGTTG TAGATCCTAA GAATTTTGAC GCTAGCAGTT TTGTGGATGT GCAGTCCGAT GTTTGCATTA TTCCCCCTAA TTCTTTTGCA TTAGCGCGAA CAGTTGAATA TTTTCGCATT CCCCGTAGCG TGCTTACCAT TTGCTTGGGG AAATCGACTT ATGCCCGTTG CGGGATCATT GTTAACATTA CCCCTTTGGA ACCAGAGTGG GAAGGGCACG TGACCTTGGA ATTTTCCAAT ACAACTCCTC TACCAGCTAA AGTTTACGCT AACGAAGGAG TCGCTCAGGT GGTATTTTTC GAGTCGGATG AGCTTTGCGA GACCTCATAT CGGGATCGTA GCGGCAAATA CCAGGGCCAA ACTGGCGTTA CGCTTCCAAA GGCTTAA
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Protein sequence | MSIKSDKWIR YMAQAHGIIE PFEPRQIREA NNARIISYGT SSYGYDIRCS NEFKIFTNIN SAVVDPKNFD ASSFVDVQSD VCIIPPNSFA LARTVEYFRI PRSVLTICLG KSTYARCGII VNITPLEPEW EGHVTLEFSN TTPLPAKVYA NEGVAQVVFF ESDELCETSY RDRSGKYQGQ TGVTLPKA
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