| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1171 |
|---|
| Symbol | |
|---|
| ID | 3706823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1280272 |
|---|
| End bp | 1280904 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637737675 |
|---|
| Product | electron transport complex, RnfABCDGE type, G subunit |
|---|
| Protein accession | YP_343204 |
|---|
| Protein GI | 77164679 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG |
|---|
| TIGRFAM ID | [TIGR01947] electron transport complex, RnfABCDGE type, G subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCG CCGGCCTGCT GCTCGGCCTA TTCGCGGTAG CCGGAACTGG CATCGTGGCA
ATGACGGAAA CATTTACCCA AGAGCAAATC GCCGCCAATG AACGGGCAGC TTTACAGCAG
GCTATTGCGG CGGTCCTGCC CCCGGCGGCC TACAATAATC CCATTCTAGA AGATACACTC
CCTATAACAG CCCCGGCTCT GCTGGGAACG GAAGAACCTT TGCTGGCTTA CCGGGCCCGC
CAAGACGGCC GACCAGTGGC TGTAATTCTC ACGGCCGTGG CGCCGGAAGG TTATAATGGA
GCAATTAAGC TGCTGGTGGG AATCCGCTAC GATGGGAGTC TGACAGGAGT ACGGGTCGTT
TCCCATAAAG AAACCCCTGG GCTGGGAGAT GAAATCGAGG AAGAAAAATC CTCGTGGATT
TTAGGCTTTA CTGGCCTCTC TCTCGGCGCT CCCCCGGAAT CGAAGTGGCA AGTCAAGCGG
GATGGCGGCA TCTTCGATCA GTTTACCGGA GCTACTATCA CACCCCGGAC CATCGTCAAA
ACTGTCCGTA ACACCCTGAG ATATTTTAAG AACCATCGGG ATAGGCTCTT TGCAGAGAAG
GAGAAAAACT TAAATGGCAC CCCCCCCCGT TAG
|
|---|
| Protein sequence | MLRAGLLLGL FAVAGTGIVA MTETFTQEQI AANERAALQQ AIAAVLPPAA YNNPILEDTL
PITAPALLGT EEPLLAYRAR QDGRPVAVIL TAVAPEGYNG AIKLLVGIRY DGSLTGVRVV
SHKETPGLGD EIEEEKSSWI LGFTGLSLGA PPESKWQVKR DGGIFDQFTG ATITPRTIVK
TVRNTLRYFK NHRDRLFAEK EKNLNGTPPR
|
|---|
| |