| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1170 |
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| Symbol | |
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| ID | 3706822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1279581 |
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| End bp | 1280291 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637737674 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_343203 |
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| Protein GI | 77164678 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACCCC CCCCCGTTAG CTACAGCCAA ATCAGCCGCG CCGGTTTATG GAATAACAAT
GTCGCCTTAG TGCAGTTGCT GGGCCTCTGT CCCCTGCTGG CAGTCACCGG AACCGTGATC
AACGGTCTGG GTCTGGGTCT GGCTACCTTG CTGACCCTAG TAGCCTCCAA CAGCCTGGTG
GCTCTCATCC GCCACTGGGT TCCCAAGGAA GTGCGCCTGC CTGTATTCGT GCTGATCATC
GCCTCCATCG TTACCACTAT CGAGCTGTTG ATGAATGCCT ATTTTTACGA TTTATATAAA
GTTTTAGGCA TTTTTATTCC GCTTATCGTA ACCAATTGCG CTATTATCGG CCGCGCTGAA
GCCTTCGCTT CCCGGCAAAA GGTGGGACGG GCCTTTACCG ATGGTCTCAT GATGGGCCTG
GGCTTTACCC TGGTGTTGAT GCTCCTGGGC GGGCTGCGGG AAGCGCTGGG CCAGGGCACC
TTGCTGGATC AAGCCCATCT CATGTTCGGC GAAGCCGCCC GGGATCTGAA ACTGACCCTC
GTAGAAGACT ATCGGGGTTT TTTGCTAGCC ATCCTGCCAC CAGGGGCTTT TATTGGCCTC
GGACTGTTGA TCGCCCTGAA AAATATGATT GACCGCCGCC TAGCCCAACG GACCGCTGTC
CAAAAAAGCT ATGCCACCAA ACCAATAGAT GTCTTGCCCG AGCGCATTTA A
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| Protein sequence | MAPPPVSYSQ ISRAGLWNNN VALVQLLGLC PLLAVTGTVI NGLGLGLATL LTLVASNSLV
ALIRHWVPKE VRLPVFVLII ASIVTTIELL MNAYFYDLYK VLGIFIPLIV TNCAIIGRAE
AFASRQKVGR AFTDGLMMGL GFTLVLMLLG GLREALGQGT LLDQAHLMFG EAARDLKLTL
VEDYRGFLLA ILPPGAFIGL GLLIALKNMI DRRLAQRTAV QKSYATKPID VLPERI
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