Gene Noc_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1154 
Symbol 
ID3706806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1261791 
End bp1262432 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content48% 
IMG OID637737659 
Productlipolytic protein 
Protein accessionYP_343188 
Protein GI77164663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTA TAAACTGTAT CTGGGCATTG ACTAGATATA GTCTCCTAGG GACAATATTA 
ATTGTAGGTG TTGCCTGTTC TTCTGGCGGC TCTCCCGAGC TATCGAAGTT ACCTCCTAAT 
GGAATTATCC TAGCTTTTGG GGACAGCCTT ACCTATGGTA CGGGGGCAGG GGGTTCCCAA 
TATAGCTACC CGAGCATTCT TGCAGAAAAG ATAGATAGGC AAGTCATCAA TGAGGGTGTG 
CCTGGAGAGT TAAGCGGGGA AGGCGTGGCT CGCCTATCCC AGATGTTGGA TCAATACCAA 
CCCCACCTTG TCATATTATG CCATGGAGGA AATGATCTCC TGCGTCAACG GACTGATAGC 
CAAATCGCGG TTAATCTCCG GGAGATGGTG GAACTTGTTC AGGAACGAGG CATTGAAATT 
GTCCTATTGG CGGTGCCCCG GCCTGCGCTA CTTTTTATGG AACCCGCCGG TTTTTACGCT 
GAGATTGCAG GGGAATATCA AATTCCCATC GATAGTGAAA CGCTTTTAAA TTTGGAGAAA 
AATCCTGCTG TTAAGTCTGA TCAAATTCAT CTTAACCGCG AAGGTTACCG CCTGTTAGCG 
GAAGCGGTTT TCCGTTTGCT GCGCAGCTCG GGCGCCCTTT AA
 
Protein sequence
MNAINCIWAL TRYSLLGTIL IVGVACSSGG SPELSKLPPN GIILAFGDSL TYGTGAGGSQ 
YSYPSILAEK IDRQVINEGV PGELSGEGVA RLSQMLDQYQ PHLVILCHGG NDLLRQRTDS 
QIAVNLREMV ELVQERGIEI VLLAVPRPAL LFMEPAGFYA EIAGEYQIPI DSETLLNLEK 
NPAVKSDQIH LNREGYRLLA EAVFRLLRSS GAL