Gene Noc_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1142 
SymbolrpmI 
ID3706906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1250802 
End bp1250999 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content50% 
IMG OID637737645 
Product50S ribosomal protein L35 
Protein accessionYP_343176 
Protein GI77164651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0291] Ribosomal protein L35 
TIGRFAM ID[TIGR00001] ribosomal protein L35 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.61072e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGC TGAAAACCAA CCGCGGTGCC GCCAAGCGTT TTAAGCGCAC GGCTAGCGGT 
AAATTCAAAC ACGCCCAGAG CCACCATAAC CACATTCTTA CTAAAAAGAG CAGCAAACGT
AAGCGTAATT TGCGCCCTTT AGCAGTAGTG AGTGCAGCGG ATGGTCCTAG GTTAGATCGT
ATGTTGCCCT ACGCTTAA
 
Protein sequence
MPKLKTNRGA AKRFKRTASG KFKHAQSHHN HILTKKSSKR KRNLRPLAVV SAADGPRLDR 
MLPYA