| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1055 |
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| Symbol | |
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| ID | 3707238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1161298 |
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| End bp | 1163178 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637737560 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_343093 |
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| Protein GI | 77164568 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000114598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAT TCCTTGCTTT GGCTTTAATG CTACTCGGCA ATACTTCAGC TACTGCGGGC
CTGCTAGACC GGCTGGGGCT CGGGGAAGCG GAAAAACCTC CGCTGCTGAA AGTTGACCAG
GCTTTTATCT ACAATGCCGC AGTAGAAGAC GGCAACACCA TTATAGCCCG GGTGAATATC
GTCGAGGGCT ATTATCTGTA CCGGGATAAA TTCGCCTTCC AAATACTGGA TACGCCGGAA
GTTAAGGTAT CCACGGCGAA ACTACCGCCT GGCAAGGTCA AAGAGGATCC ATTTTTCGGT
ACCACGGAGG TTTATGAAGG CAAAACCGAA CTCCAAATTC CCATTAAGCT GAACCGGCAA
GGCACGACGC CCGAGACGGT CATCCTAGAG GCATCCCTGC AAGGATGCTC CGAAATTCAC
GGAATCTGCT ATCCCCCCGC TACGCAGAGG ATTAGCCTGG AACTACCTTC GCCTTCCATT
GATGAAGCGG GCTCCATAGA AGCAGATTCT GGTCTAACCC CGGAACAATC TCCCGCTATT
GCCCTATCTA CTCAAGACCG TATCGTTCAA ACCCTGTTTA ATGACCAGAT CTGGCTTACC
TTAGCCGCCT TCTTCGGCTT TGGATTATTA TTGTCCTTCA CACCCTGCGT CTTTCCTATG
ATCCCTATTT TGTCAGGGAT TATCGTTGGT CAAGGCAAAA ATATCACGAC TTGGCGCAGC
TTTATGCTGT CCCTTGCATA TGTCCTCGCC ATGGCGCTCA CTTATACCGT GGCGGGCATT
GTCGCCAGTT TGCTTGGAGA AAACCTGCAA GCTACCTTCC AGCATCCCGG CATTCTAATT
GGCGCCAGCT TAATTTTTGT GCTGCTGGCT CTTTCTATGT TTGATTTGTA TCACATCCAG
CTACCTAGCC GTCTCCAGAC ACGGCTGCTT CGCCTCAGCC AGAAACAAAA AGGGGGCACG
CTGCTAGGAG CGGGACTAAT GGGCTTATTC TCGGCCCTTA TTGTCGGCCC CTGTGTCGCC
CCCCCCTTGG CAGGCGCCTT AATCTATATT GGCGAAAGCG GGGATGCCTT ATTAGGCGGT
TCGGCTCTAT TTGCCTTAAG CATGGGGATG GGAACGCCTC TACTATTCCT CGGCGCTTCG
GCGGGCAAAC TTCTGCCCCA TGTCGGTAGT TGGATGCAAC CGATCAAGTA TCTCTTTGGG
GTCTTATTGC TCGCCGTGGC TATCTGGCTC CTCTCGCGCA TCCTACCCCA GGCGATCATC
ATGCTCCTTT GGGGAGCACT GTTTATTATT GGCGCCGTCT ATCTCGGTGC GTTGGAAGCG
CTAGGGCCGG ATACTACTGG CTGGAGCAGA CTGTGGAAGG GAATGGGACT CATCTCCTTA
GTTTATGGCA CCTTGCTCAT CATAGGCGCT GCGAGCGGCG GAGGCACGGA GTGGCAGCCC
CTGCGAGGAT TAACCGTAGC AAGATCAGCC AATACGCCAA CCAGCACTGA AAGCCTAAAT
TTCCAGCCTG TAAAAGGCAT CCAGGGACTC CAGCTTGCAC TCCAAGGAGC GGGAGAGCGT
TTGGTTATGC TAGACTTTTA CGCTGATTGG TGCGTGGATT GTAAGCGAAT GGAAGCCACT
ACCTTTAGCG ATCCCACAGT GAAAAATGCG CTTCGCAATA CCCTATTGTT ACAAACTGAT
GTCACCGCCT ACGACGACCA AGATAAGGCA CTGCTTAATC AACTTTCTCT TTATGGTCCC
CCCTCAATAC TCTTTTTTGG GCCGGACGGA AGAGAACTTA GACAAGTTCG ACTTATTGGC
CAAGCCTCGC CGGAAGAGTT CTTGCGACAC TTACAACAGG TAAACACTTT GCTAGCGCAG
CAGACATCCA AGGGAGCATA G
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| Protein sequence | MRIFLALALM LLGNTSATAG LLDRLGLGEA EKPPLLKVDQ AFIYNAAVED GNTIIARVNI
VEGYYLYRDK FAFQILDTPE VKVSTAKLPP GKVKEDPFFG TTEVYEGKTE LQIPIKLNRQ
GTTPETVILE ASLQGCSEIH GICYPPATQR ISLELPSPSI DEAGSIEADS GLTPEQSPAI
ALSTQDRIVQ TLFNDQIWLT LAAFFGFGLL LSFTPCVFPM IPILSGIIVG QGKNITTWRS
FMLSLAYVLA MALTYTVAGI VASLLGENLQ ATFQHPGILI GASLIFVLLA LSMFDLYHIQ
LPSRLQTRLL RLSQKQKGGT LLGAGLMGLF SALIVGPCVA PPLAGALIYI GESGDALLGG
SALFALSMGM GTPLLFLGAS AGKLLPHVGS WMQPIKYLFG VLLLAVAIWL LSRILPQAII
MLLWGALFII GAVYLGALEA LGPDTTGWSR LWKGMGLISL VYGTLLIIGA ASGGGTEWQP
LRGLTVARSA NTPTSTESLN FQPVKGIQGL QLALQGAGER LVMLDFYADW CVDCKRMEAT
TFSDPTVKNA LRNTLLLQTD VTAYDDQDKA LLNQLSLYGP PSILFFGPDG RELRQVRLIG
QASPEEFLRH LQQVNTLLAQ QTSKGA
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