Gene Noc_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1053 
Symbol 
ID3707236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1160070 
End bp1160513 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID637737558 
Product3-dehydroquinate dehydratase 
Protein accessionYP_343091 
Protein GI77164566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000000105156 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACC TATTGGTCAT TCACGGTCCT AATCTTAATC TGCTCGGTAC CCGAGAACCC 
AAATATTATG GCTCCATTAC TTTAGAGGCT ATTAATAGCA ATTTAACGCA TCAAGCGGCT 
CAAGCAGGCC ATCATTTAAC TTGCTTCCAG GCTAATGCGG AACATATTCT CATCGAGCAA 
ATTCATAGCG CAGCTCATCA AGATATAGCG TTTATTATTA TTAATCCGGC AGCTTTTACC 
CATACCAGTA TCGCTCTGCG GGATGCCTTA GCGGCGGTGG CCATACCCTT TATCGAAGTG 
CACTTATCGA ATGTCCATAG GCGGGAAGCA TTTCGCCGTC ATTCCTATTT TTCCGATATT 
GCCGAGGGGG TTATTAGTGG CTTGGGACCT ACGGGCTACG AATTAGCTTT ACAAGCGGTA 
TTCGCCCGCC TCTTGCCTCC CTAA
 
Protein sequence
MANLLVIHGP NLNLLGTREP KYYGSITLEA INSNLTHQAA QAGHHLTCFQ ANAEHILIEQ 
IHSAAHQDIA FIIINPAAFT HTSIALRDAL AAVAIPFIEV HLSNVHRREA FRRHSYFSDI 
AEGVISGLGP TGYELALQAV FARLLPP