| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1051 |
|---|
| Symbol | |
|---|
| ID | 3707234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1158218 |
|---|
| End bp | 1159558 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637737556 |
|---|
| Product | Acetyl-CoA carboxylase, biotin carboxylase |
|---|
| Protein accession | YP_343089 |
|---|
| Protein GI | 77164564 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00003463 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGATA AGATTGTTAT CGCCAATCGG GGCGAAATCG CCTTGCGTAT CCTCCGGGCT
TGCTGGGAAT TAGGGCTCAA AACCGTAGCC ATCCACTCTG AAGTGGATCG CGAACTCAAA
CATGTTCTAC TAGCGGATGA GACGGTTTGT ATCGGCCCTG CGGCATCTTC TCAAAGCTAC
TTGAATATTC CCGCCGTGAT CAGCGCCGCT GAGATTACCG ATGCCGTCGC CATTCACCCA
GGTTACGGTT TTTTGTCCGA AAACGCCGAC TTTGCTGAAC GCGTTGAACA AAGCGGCTTC
GTCTTTATCG GGCCGCGGCC TGAGACTATC CGTCTGATAG GCGATAAAGT CTCCGCTATT
AAGGCCATGA AGTCCTCCGG CGTGCCATGC GTACCCGGCT CCGAAGGGCC CCTCGGAGAA
GATGATGAGG AAAATATAGC CATTGCCAAG GAAATCGGCT ATCCGGTCAT GATTAAGGCT
TCAGGGGGAG GGGGAGGCCG AGGAATGCGC GTTGTTCATT CTGAGGCGCA TTTGCCCACC
GCTATTTCCC TCACCCGGAG CGAAGCCAGC GCCGCCTTTG GCAATGACAT GGTTTACATG
GAAAAATATC TGGAAAATCC TCGTCATGTG GAATTCCAAG TTCTGGCCGA CACCCACGGT
CAAGCCATCT ACCTCGGCGA GCGGGACTGT TCCATGCAGC GCCGTCACCA GAAAGTTGTT
GAAGAGGCAC CTGCCCCAGG CATTACCAAT GAACAACGGC AACGCATGGG AGAAATCTGC
ACTGAAGCCT GCCGCAAGAT GGGTTACCGA GGAGCAGGTA CGTTTGAATT TCTCTATCAA
GATGGCGAAT TTTATTTCAT TGAAATGAAT ACCCGAGTCC AGGTGGAACA CCCTGTAACT
GAAATGATCA CCGGGATAGA CATTGTCAAG GAGCAACTCC GTATTGCTGC CGGAGAGAAG
CTCAGTTATC GCCAGGAAGA TATCATGATC CACGGGCACG CCATCGAGTG CCGCATCAAC
GCCGAGGATC CCACTAATTT CATGCCCAGC CCAGGAACGG TGACAAGATA TCATACGCCT
GGTGGCCCGG GCGTCCGAAT AGATTCCCAC CTATACGCTG GTTATACTGT TCCCCCTCAC
TACGATTCTT TGATCGGCAA ACTCATTACC CATGGGGAAA CCCGGGAAGC AGCCATTGCG
CGCATGCAAA TTGCACTCAC TGAACTGGTC ATCGATGGCA TTAAGTGTAA TGCGCCACTC
CATCAAAAAA TCCTCGACAA CACGCACTTC CGGGCTGGCG GCGCTAATAT CCACTACCTA
GAGCGAATGC TAGGATTATA G
|
|---|
| Protein sequence | MLDKIVIANR GEIALRILRA CWELGLKTVA IHSEVDRELK HVLLADETVC IGPAASSQSY
LNIPAVISAA EITDAVAIHP GYGFLSENAD FAERVEQSGF VFIGPRPETI RLIGDKVSAI
KAMKSSGVPC VPGSEGPLGE DDEENIAIAK EIGYPVMIKA SGGGGGRGMR VVHSEAHLPT
AISLTRSEAS AAFGNDMVYM EKYLENPRHV EFQVLADTHG QAIYLGERDC SMQRRHQKVV
EEAPAPGITN EQRQRMGEIC TEACRKMGYR GAGTFEFLYQ DGEFYFIEMN TRVQVEHPVT
EMITGIDIVK EQLRIAAGEK LSYRQEDIMI HGHAIECRIN AEDPTNFMPS PGTVTRYHTP
GGPGVRIDSH LYAGYTVPPH YDSLIGKLIT HGETREAAIA RMQIALTELV IDGIKCNAPL
HQKILDNTHF RAGGANIHYL ERMLGL
|
|---|
| |