Gene Noc_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1050 
Symbol 
ID3707233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1157322 
End bp1158200 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content51% 
IMG OID637737555 
Productribosomal protein L11 methyltransferase 
Protein accessionYP_343088 
Protein GI77164563 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00582001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTGGA TTCAATTTCA GCTCGAGGTC AGTGCCGGGC AAGTTGAACG CTTGTCAGAC 
CAATTAAGCG AAGCGGGAGC GGTAGCGGTT ACGCTACTGG ACGCAACCGA TCAGCCGCTT
TTCGAACCAC CGCCGGGAGA GACCCCTTTG TGGTCCCGAA CTCGGGTGAA TGCCCTATTT
CCAATGGCCT CTGATCCGGA TACTTTGCTA CAGGAGTTGA AACAGGACTG GGCTCCGGAG
TCCTTCCCCT CCTACCGCTG GGAAATTTTG GCGGATCAAA ACTGGGAACG GGCTTGGATG
GACCACTTTA AGCCCCTACG CTTTGGCTCA CAGCTTTGGG TTTGCCCGAG CTGGCTCCCT
CCCCCCGAGC CGGAAGCAGT TAATCTCTTA CTTGATCCGG GTCTTGCCTT CGGCACGGGC
ACACACCCAA CCACCGCACT ATGCTTGGAA TGGCTAACCA ATGCCAATCT CAACCAAGCT
TGTATTATCG ATTATGGCTG TGGTTCTGGC ATCCTAGCCA TTGCCGCTCT TAAACTGGGG
GCCACTGCTG CTGTTGCAGT GGATCACGAT CCCCAAGCCC TATTGGCTAC CCAGGAAAAT
GCCACCCACA ATGGGGTTAT CTCTCAACTC CAAGTCTCAT CGCCGTCTGA ACTTATTGAA
ATAAAGGCGG ACTTCTTGGT CGCAAATATC TTAGCGGAGC CTTTGCTAAG ACTAGCTTCT
CTCTTTGCTA GATTGACTTA CCCTGGTGCT TACCTCATTT TATCAGGTAT CACCTCCGAT
CAAATTCAAC AAATCCTTCA AACCTATAAT AATTGGTTTA CCTTTAACAC TCCTATGATC
AAAGAAAATT GGGTTCTGCT GGCTGGACAT CGGCGTTAG
 
Protein sequence
MPWIQFQLEV SAGQVERLSD QLSEAGAVAV TLLDATDQPL FEPPPGETPL WSRTRVNALF 
PMASDPDTLL QELKQDWAPE SFPSYRWEIL ADQNWERAWM DHFKPLRFGS QLWVCPSWLP
PPEPEAVNLL LDPGLAFGTG THPTTALCLE WLTNANLNQA CIIDYGCGSG ILAIAALKLG
ATAAVAVDHD PQALLATQEN ATHNGVISQL QVSSPSELIE IKADFLVANI LAEPLLRLAS
LFARLTYPGA YLILSGITSD QIQQILQTYN NWFTFNTPMI KENWVLLAGH RR