Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0999 |
Symbol | |
ID | 3707391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1106497 |
End bp | 1107486 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637737504 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_343037 |
Protein GI | 77164512 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.170606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCT TTGTTACCGG TGCAACCGGC TTCGTGGGCT CGGCGGTAGT CAAACAACTA CTCGATGCGG GAGAAACCGT CCGGGTATTA GCCCGCTCTA ATAGCAATCG GCGTAATTTG GAAGGGCTAC CCGTAGAAAT CTTTGAAGGC GATCTCAAGG ATCAACGGCG CCTAGAAAAA GCGCTCCATG GCTGCCAAGC CCTTTTTCAT GTCGCGGCTG ATTACCGCTT ATGGGCCCCC CGTTCGCAAG ACTTTTATGA CACTAATGTC CAGGGCTCCC AAAATATCAT GCACGCTGCG GCGGAAGCCG GCGTTAACCG TATTGTTTAC ACCAGTAGCG TCGCCACGCT GGGATTAAGC CCTGATGGCA CGCCAGCCCA TGAGGAGACC CCTTCCAGCC TTGAAACCAT GATCGGCCAC TATAAACGAT CTAAATTCTT GGCTGAGGAG TCCATCAAGG ATCTAGGACA CCGGCTGAAG CTGAATATCG TGATTGTGAA TCCCTCCACC CCCATTGGAC CGCGGGATAT CAAACCCACG CCTACCGGCA GAGTCATTGT CATGGCCGCT TCGGGAGGCA TGCCCGCCTA TATGAACACT GGCCTCAACG TAGTCCATGT GGATGATGTG GCCGCCGGCC ATCTCCTGGC CTTTGAAAAA GGCCGCATTG GCGAGCGTTA TATCCTTGGA GGAGAAAATC TCACTCTGCG CGATATTCTA GAAGCAATCG CCCAGCTTAC CCACCGCCGT CCCCCCAGAT TCCGGCTTTC CCCTCATGCG GTCCTGCCTA TCGCCCATCT TGCCCAAGGC TGGGCCCGCC TGACCAGCGG CAAAGAACCC ATGACCACTG TCGATGGCGT GCGGATGGCA AAGAAATATA TGTTTTTTTC TAGCACTAAG GCGGAACAAC TGCTAGGTTA TCAATCCCGC CCCGCCCAGG AAGCGATTCA TGATGCGATT AGCTGGTTTC AGGCTAATGA CTATCTGTAG
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Protein sequence | MTSFVTGATG FVGSAVVKQL LDAGETVRVL ARSNSNRRNL EGLPVEIFEG DLKDQRRLEK ALHGCQALFH VAADYRLWAP RSQDFYDTNV QGSQNIMHAA AEAGVNRIVY TSSVATLGLS PDGTPAHEET PSSLETMIGH YKRSKFLAEE SIKDLGHRLK LNIVIVNPST PIGPRDIKPT PTGRVIVMAA SGGMPAYMNT GLNVVHVDDV AAGHLLAFEK GRIGERYILG GENLTLRDIL EAIAQLTHRR PPRFRLSPHA VLPIAHLAQG WARLTSGKEP MTTVDGVRMA KKYMFFSSTK AEQLLGYQSR PAQEAIHDAI SWFQANDYL
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