Gene Noc_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0970 
Symbol 
ID3707401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1070633 
End bp1071214 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content49% 
IMG OID637737477 
Productelectron transport complex, RnfABCDGE type, A subunit 
Protein accessionYP_343010 
Protein GI77164485 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0207899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT ATGCCCTTAT TTTAGTCAGC ACGGTGCTGG TCAACAATTT TGTGCTCGTG 
AAATTTCTAG GACTCTGTCC CTTTATGGGA GTCTCCCGAA AGCTGGAAAC TGCAATAGGT 
ATGGGACTGG CGACAACTTT TGTACTTACC CTATCCTCAG TGTGCAGCTA TTTAATTAAT 
GAATACCTAT TGACGCCCTT GGGAATCGAA TACCTGCGGA CCATCGCCTT TATCCTGGCC 
ATCGCTTTTG TGGTGCAATT TACGGAAATG GTGGTCCATA AAACCAGTCC GCTTTTGTAT 
CAGGTATTAG GAATTTTTTT ACCACTGATC ACCACTAACT GCGCGGTACT GGGAGTGGCC 
CTGCTAAATA TTCAGCACCA ACATGGCTTC CTATCCTCGG CGCTCTATGG CTTCGGCGCC 
GCTGTTGGCT TCTCCCTGGT ATTGATCTTA TTTGCCGCCC TGCGTGAACG GATTGCGGCA 
GCAGAAGTGC CCCAACCTTT TCAGGGTCCC GCCATCGGGC TGATTACCGC CGGGTTAATG 
TCCATGGCCT TTATGGGTTT CGCCGGATTA GTCAAAGGAT AA
 
Protein sequence
MSEYALILVS TVLVNNFVLV KFLGLCPFMG VSRKLETAIG MGLATTFVLT LSSVCSYLIN 
EYLLTPLGIE YLRTIAFILA IAFVVQFTEM VVHKTSPLLY QVLGIFLPLI TTNCAVLGVA 
LLNIQHQHGF LSSALYGFGA AVGFSLVLIL FAALRERIAA AEVPQPFQGP AIGLITAGLM 
SMAFMGFAGL VKG