| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0939 |
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| Symbol | |
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| ID | 3707330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1038059 |
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| End bp | 1038988 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637737448 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_342981 |
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| Protein GI | 77164456 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.013426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGATT TTAAACGTGG CGATTCTAAT TACGTACGGT CCGCCTATAG GCGGCCAGGT
TCTGAACGGC CCGAATATGG GCGTTCTAAA AATCGTGGGC AGATTTGGTC TGTCATCATC
GTGCTTTTGC TGATCGTCGT GTTAGCGGGA GGCGCGGTAT GGATGTATCT CAATGGTAAA
GGCGAAGAAG AAGCCGTGGC AAGCAAAGAA TCGGAAGTTG CTAGCCCGCA AATGGCTGAG
TCAAACACCA CCGAGTTGGA ACCTTCCCAG CAAGGAGGCA CTGAAGAAGA ATTTGCATCT
ACAGCTCCCA GTGAAGAAGA TGAGTTTGCA TCCTCAACTC CCAGCGAGGA AGAAGATGAG
TTTGCTTCGA TTTTAGAGGA ATTAGGGGTA GGGAGTGAAC CTAACGAAGA AGAAGCTTCC
ACTCCCAGTA CAGTAGAGCC GCAAGCAGAG GGATCAGCCG TTGAAGGTAA TACTGTAATA
GGGACTGCGC CGGAGGAGCC TCAGTTCTTC GATGAAGAAG AAGATCAATT TTCTACCGAG
GAATTTACCA TACCTGAACA AGAGCAACCA GAAGAAGCGG TTGGAGAACA AGCTGAGCAA
GCTACTGGGC AGTTTAGAGG AACTGAGCGG CAAGTAGAGG AGACCCAAAA GAGGGGAGAA
GCTAATAATA AGATGAAGGA AGCGGAGGAG GAAGATTTTG CTGCGGTAAC TCCATCATTT
GAAGAAGCTC CAACCAGATC CCAGGCTGAA GGATCATTTC CACAGACGGT AACTGTTCAG
TCAGGCGATT CTCTTTCCGT TATCGCTGAC CGTGTTTACG GTGATGCGGG TAAGTGGCGT
TTAATTTATG AAGCTAACCA GGATCAATTG GAAAATCCTG ACCAATTGTT GGTAGGGATG
AAGTTAACCG TTCCTGATCC AAATGATTAA
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| Protein sequence | MADFKRGDSN YVRSAYRRPG SERPEYGRSK NRGQIWSVII VLLLIVVLAG GAVWMYLNGK
GEEEAVASKE SEVASPQMAE SNTTELEPSQ QGGTEEEFAS TAPSEEDEFA SSTPSEEEDE
FASILEELGV GSEPNEEEAS TPSTVEPQAE GSAVEGNTVI GTAPEEPQFF DEEEDQFSTE
EFTIPEQEQP EEAVGEQAEQ ATGQFRGTER QVEETQKRGE ANNKMKEAEE EDFAAVTPSF
EEAPTRSQAE GSFPQTVTVQ SGDSLSVIAD RVYGDAGKWR LIYEANQDQL ENPDQLLVGM
KLTVPDPND
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