| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0928 |
|---|
| Symbol | |
|---|
| ID | 3707318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1025384 |
|---|
| End bp | 1025641 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637737436 |
|---|
| Product | carbon storage regulator |
|---|
| Protein accession | YP_342970 |
|---|
| Protein GI | 77164445 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATTT TGACTCGGCG CGTTGGCGAA GCCTTGATGA TTGGAGATCA GGTCACGGTG
ACAGTGCTAG GCGTAAAGGG TAATCAGGTA AGAATTGGGG TGACAGCACC TAAGGAAGTC
ACGGTTCATA GGGAAGAGAT TTACGCACGC ATTCAGCGTG AAAAGGAGCA AGCTAACGGT
AGGGGGCAAG TCAGCGAGTC AGAGTTTACG GAAGAAGCGT TTCGGGCTGC GCCTGCTATT
TCCGGAAGTG GCGAGTAA
|
|---|
| Protein sequence | MLILTRRVGE ALMIGDQVTV TVLGVKGNQV RIGVTAPKEV TVHREEIYAR IQREKEQANG
RGQVSESEFT EEAFRAAPAI SGSGE
|
|---|
| |