| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0924 |
|---|
| Symbol | |
|---|
| ID | 3707314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1019737 |
|---|
| End bp | 1020765 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637737432 |
|---|
| Product | DNA recombination protein, RecA |
|---|
| Protein accession | YP_342966 |
|---|
| Protein GI | 77164441 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | [TIGR02012] protein RecA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGA ACCGGAAAAA AGCGCTAGGA GCTGCCCTCT CTCAAATTGA GAAGCAGTTT
GGCAAAGGCG CCGTGATGCG TCTTGGAGAT GCGAGCATTG TACGCGAGGT CGAGGTAATC
TCGACGGGGT CTTTGGGGCT AGATATCGCG CTTGGGGTAG GAGGGTTACC GCGAGGCCGC
GTGGTTGAAA TTTTTGGCCC AGAGGCGTCG GGTAAGACAA CGTTAGCTCT GCAAGTAGCG
GCGGAAGCCC AGGCGTTGGG GGGGACGGCG GCTTTTGTGG ACGCTGAACA CGCCCTTGAC
CCCCAGTATG CCGAGCGATT GGGCGTGAGT GTTGAGGATC TTCTGGTCTC CCAACCGGAT
ACCGGAGAAC AAGCCCTAGA AATTGCCGAT ATGCTGGTGC GTTCGGGGGC AGTGGATGTG
GTTGTTATAG ACTCGGTGGC CGCGCTGACC CCAAAAGCGG AAATTGAGGG GGAAATGGGT
GACTCCCATG TGGGCTTGCA AGCCAGACTC ATGTCCCAGG CTCTACGCAA GCTTACCGCC
AATATTAAGC GTTCCAATAC CCTGGTGATT TTTATTAATC AAATCCGAAT GAAAATTGGG
GTGATGTTTG GTAGTCCGGA GACAACTACT GGGGGTAATG CGCTTAAATT TTATGCTTCT
GTACGGTTGG ATATTCGACG GGTGGGAGCG CTCAAAAAGG GGGACGAGAT CGTTGGTAAC
GAGACGCGGG TGAAGGTGGT TAAAAACAAA ATGGCGCCGC CTTTTAAACA AGTTTCCTTC
GATATTCTTT ATGGATCGGG GGTCTCCCGG GAGGGGGAAA TTATCGATCT AGGGGTGCGG
GAAGGGTTCA TTGAAAAGGC GGGCGCTTGG TATAGTTATA ACGGTGAGCG GATTGGTCAG
GGCCGGGATA ATGTACGCCA GTTCCTCAAG GAACATCGGG AGCTCGCCCA AGGCATCGAA
GCCCATATCC GGGAGAAGTT ATTGCCGGGC AAAGCAGCGT TAGAGGAAGT CCAGGAAGCG
GTAACCTGA
|
|---|
| Protein sequence | MDENRKKALG AALSQIEKQF GKGAVMRLGD ASIVREVEVI STGSLGLDIA LGVGGLPRGR
VVEIFGPEAS GKTTLALQVA AEAQALGGTA AFVDAEHALD PQYAERLGVS VEDLLVSQPD
TGEQALEIAD MLVRSGAVDV VVIDSVAALT PKAEIEGEMG DSHVGLQARL MSQALRKLTA
NIKRSNTLVI FINQIRMKIG VMFGSPETTT GGNALKFYAS VRLDIRRVGA LKKGDEIVGN
ETRVKVVKNK MAPPFKQVSF DILYGSGVSR EGEIIDLGVR EGFIEKAGAW YSYNGERIGQ
GRDNVRQFLK EHRELAQGIE AHIREKLLPG KAALEEVQEA VT
|
|---|
| |