Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0911 |
Symbol | |
ID | 3707296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 997758 |
End bp | 998981 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637737414 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_342953 |
Protein GI | 77164428 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000280403 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTATCAC CGCAGCAGAT TCTCGATGAG ATTCGGCGGG GAACCGAAGA GGTTTTACTT GAAGAAGAAC TTAAGCTAAG ACTGGAGCAA GGTAGAATCT TGCGTGTCAA AGCGGGCTTT GACCCTACTG CACCAGAGCT GCATTTAGGA CATACGGTGT TGCTTAATAA ACTCCGTCAA TTCCAGGAAT TTGGGCATGA AGTTTTGTTT TTGATTGGCG ATTTCACCGG AATGATTGGT GATCCTTCAG GAAAAAATGT AACGCGCCAG CCCCTTACTC GTGATAAAAT CTTGGAGAAT GCCCGCACCT ACGAAGAACA AATCTTTAGG GTACTCGATC CGGAAAAGAC TCTGGTGGTT TTTAATTCTA GCTGGATGAG TGGAATGACG GCTGCTGATT TAGTACGACT TTCCTCACAT TATACAGTAG CTCGCATGCT TGAGCGTGAC GATTTCTACA AACGCTACCA AGGTAAGCGG CCGATTGCCA TCCATGAATT TCTCTATCCT CTACTACAAG GTTATGATTC AGTGGCGTTA AAGGCTGATG TAGAGCTAGG CGGCACAGAC CAAAAATTTA ACCTACTAGT AGGCCGCGAT CTACAGAAAG CTTATGGCCA AGAGCAGCAA ATTATCATTA CCATGCCTAT TTTAGAAGGG CTGGATGGGG TACAGAAGAT GTCCAAATCT CTTGGGAATT ATATAGGTAT CAGCGAACCA CCAAGGGAGA TATTCGGTAA GCTCATGTCG ATTTCTGACG ATCTAATGTG GCGTTACCTT GAACTATTGA GTTCTCGACC AATGAGCGAG ATTAGCCGGT GGAAGAAGGA AGTTGAGCAG GGAGCCAATC CTCGGGATAT TAAAGTAAAG CTTGCGAAAG AGATCGTTGC TCGCTTCCAT GATGATAGTA TGGCTGAACA AGTCCATGAG GCGTTTGTGG CCCAATTTCG CCGGGGTGCT ATGCCAGAGG ATATTCCCGA AATTCTTATA GTTGCGGGGA GAGAGGGGAT AGCTATTGCT AGGCTGTTAA AAGAATCGGC CCTGACTGCA AGCACCTCGG AATCCCTGCG CTTGATTAAA CAGGGAGCTG TTAAAATAGA TGGTCAGCGC CTTGGAAACC AATCCCTCCA AATACTACCA GGCATTACTC ACGTCGTGCA GGTAGGTAAA CGGCGTTTCG CCCGAGTATC CATACGGCTT TCTGAGGACC AATGTAGAAA ATAA
|
Protein sequence | MVSPQQILDE IRRGTEEVLL EEELKLRLEQ GRILRVKAGF DPTAPELHLG HTVLLNKLRQ FQEFGHEVLF LIGDFTGMIG DPSGKNVTRQ PLTRDKILEN ARTYEEQIFR VLDPEKTLVV FNSSWMSGMT AADLVRLSSH YTVARMLERD DFYKRYQGKR PIAIHEFLYP LLQGYDSVAL KADVELGGTD QKFNLLVGRD LQKAYGQEQQ IIITMPILEG LDGVQKMSKS LGNYIGISEP PREIFGKLMS ISDDLMWRYL ELLSSRPMSE ISRWKKEVEQ GANPRDIKVK LAKEIVARFH DDSMAEQVHE AFVAQFRRGA MPEDIPEILI VAGREGIAIA RLLKESALTA STSESLRLIK QGAVKIDGQR LGNQSLQILP GITHVVQVGK RRFARVSIRL SEDQCRK
|
| |