| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0905 |
|---|
| Symbol | glgC |
|---|
| ID | 3707290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 988651 |
|---|
| End bp | 989922 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637737408 |
|---|
| Product | glucose-1-phosphate adenylyltransferase |
|---|
| Protein accession | YP_342947 |
|---|
| Protein GI | 77164422 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.693448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA ATTATAGCGC ACGTTTTGTT AGCCGTCTTA CCCGTGATAC TTTGGCGCTA
ATTCTCGCTG GAGGGCGAGG TTCTCGGTTA AAGAATTTAA CAGCATGGCG AGCTAAGCCT
GCGGTACCTA TCGGAGGTAA ATTCCGCATT ATCGATTTTC CTCTTTCTAA CTGTGTTAAC
TCCGGCGTCC GCCGTATTTG CGTATTAACG CAATATAAAG CCCATTCGCT GGTTCGTCAT
ATTCAGCAAG GCTGGGGATT CATGCGGGGC TATCTGGGCG AGTTTGTGGA ATTGATGCCG
GCCTCACAGC GGATTGAAGA CTCCTGGTAT GCGGGCACTG CTGATGCAGT GTATCAGAAT
CTCGATATTG TCCGCTCCCA TAACCCGGAA TATGTACTCA TTCTGGCAGG CGATCATGTC
TACAAGATGG ATTATGGAGA TATGCTAGCT TACCATGTGG AGCGCGAAGC CGATATGACC
GTTGGTTGTA TCCATGTTCC GCTCAAGGAA GCCAAGGCCT TTGGCGTTAT GAGTGTAGAC
GAGAATTTTC GAGTGACGGA GTTTACGGAG AAGCCAGAGC ACCCTCAACC CTCGCCAGGG
CGATCTGACG AAACCTTGGC TTCTATGGGT ATTTACGTTT TTAATGCCGC TTTTCTTTAT
GAACAACTGA TTAAAAACGC GGATGCCTTT AATTCTTCTC ATGACTTTGG TAAGGATATT
ATTCCATCCA TCCTACGTAG CCATTATCGA GTAATTGCTT TCCCTTTCAG TGATGTCCAA
GGGGGGGATC CTGGCTATTG GCGCGATGTG GGGACGGTGG ATGCCTTTTG GAACGCTAAT
CTTGAGTTGA TCGGAGTCAG TCCGGAATTG AACCTTTATG ATGAGGATTG GCCGATATGG
ACCTACCAAG CTCAGCTTCC TCCCGCAAAA TTTATTTTTG ATAACGAAGA TAGACGGGGA
ATGGCTGTGG ATTCTATGGT TTCGGGGGGA TGCATCATCG CTGGTGCATG GATAGGTCAT
TCATTGTTAT TCTCCAATGT ATGGGTGCAA TCTCATACAG AGGTGGCTAG CAGTGTAATA
TTGCCGGATG TGAAGATAGG TAAGCATTGC CATATTAGGA AGGCGATCTT GGATAAGGGA
TGTAACGTAC CTGATGGTAC GGTGATTGGT GAAGATCTGG AAGAGGATAA AAGACGTTTC
TACGTTACGG AGGAAGGGGT GGTCTTAGTA ACCCCGGAGA TGCTGGGTCA AAAATACCGC
TATATCCGTT GA
|
|---|
| Protein sequence | MTKNYSARFV SRLTRDTLAL ILAGGRGSRL KNLTAWRAKP AVPIGGKFRI IDFPLSNCVN
SGVRRICVLT QYKAHSLVRH IQQGWGFMRG YLGEFVELMP ASQRIEDSWY AGTADAVYQN
LDIVRSHNPE YVLILAGDHV YKMDYGDMLA YHVEREADMT VGCIHVPLKE AKAFGVMSVD
ENFRVTEFTE KPEHPQPSPG RSDETLASMG IYVFNAAFLY EQLIKNADAF NSSHDFGKDI
IPSILRSHYR VIAFPFSDVQ GGDPGYWRDV GTVDAFWNAN LELIGVSPEL NLYDEDWPIW
TYQAQLPPAK FIFDNEDRRG MAVDSMVSGG CIIAGAWIGH SLLFSNVWVQ SHTEVASSVI
LPDVKIGKHC HIRKAILDKG CNVPDGTVIG EDLEEDKRRF YVTEEGVVLV TPEMLGQKYR
YIR
|
|---|
| |