Gene Noc_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0879 
Symbol 
ID3707185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp961241 
End bp961678 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content50% 
IMG OID637737382 
Productsuppressor protein DksA 
Protein accessionYP_342922 
Protein GI77164397 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTA ATGACAGGAA TCTGGTGCAA TCTCTCCAAG AATTTACCCC CTATCAACAA 
AAAAAGGGGG AAGAATACAT GAGCGAAGCG CAGATTGAGC ATTTTCAAGA ACTCTTGCTG
AACTGGAGGC AGCGGCTTAT GGAAGAGGTT GATCGGACTG TTCACCAGAT GCAGGATGAG
GCTGCAAATT TCCCCGATCC CAGCGATCGT GCCTCGCAGG AAGAAGAATT TACGTTAGCG
CTACGCGCTA GGGATCGGGA ACGTAAGCTT ATCGGAAAGA TTAATGAACG CCTACGGAGC
CTTGATAAGG GCGATTACGG ATACTGCGAT GGCTGTGGGG CCGAAATTGG CATTCGGCGC
CTTGAGGCCC GTCCCACAGC TACCCTCTGT ATTGATTGCA AAACACTAGA CGAAATCAAG
GAGAAACAAC GGGCCTGA
 
Protein sequence
MAINDRNLVQ SLQEFTPYQQ KKGEEYMSEA QIEHFQELLL NWRQRLMEEV DRTVHQMQDE 
AANFPDPSDR ASQEEEFTLA LRARDRERKL IGKINERLRS LDKGDYGYCD GCGAEIGIRR
LEARPTATLC IDCKTLDEIK EKQRA