| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0872 |
|---|
| Symbol | |
|---|
| ID | 3707177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 952471 |
|---|
| End bp | 953469 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637737374 |
|---|
| Product | Alpha/beta hydrolase fold |
|---|
| Protein accession | YP_342915 |
|---|
| Protein GI | 77164390 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCC TTAGCGATTT TCAGCCCGCC TGGTGGCTGC CTGGCCCCCA TATTCAAACG
GTATGGGGGT CGCGCTTTCG CCCCCCCTCC CGGATAGAGA TTTTGTGGGA ACGGTTAGAG
CTGCCGGATG GGGATTTTGT GGATCTCGCT TGGAGCGGTA AGGAAAAAGG CCCTATCGTC
ATCGTTATTC ATGGTCTTGA AGGGTCCTAT CGCTCCCGTT ACGCTTCTGG CATTCTCAAA
GCTATTGCCC AGCGGGGCTG GCGCGGAGTG CTGCTACACC TGCGCGGTTG TAGCGGCGAA
CCCAACCGGC TAACCCGCAG CTATCACTCC GGCGATACGG GGGATTTTCA AACACTGCTC
TCCAGCCTGC GCCAGCGGGA ACCCGCTACC CCTTTAGCAG CGGTTGGTTA TTCCCTGGGG
GGCAACATTC TGCTCAAATG GCTTGGTGAA ACCGGCTCCC AGGCAAATCT CAGGGCCGCG
GTTGGGATTT CCGTTCCCTT CGATCTGGCC CGGGCGGCCT GGCAGTTAGA ACAGGGCCTC
TCCCAAGCCT ATCAGTGGTC CCTGGTAAAG GCCCTGCAAC GTTCCGTGCG GTATAAACTT
AACCATCCAG ACTGCCCTTT CGATCTCAGA ACCCTAAAAG GAGTCCGGAC ATTTAAGGAA
TTTGACGATT TAGTGACCGC TCCCCTCAAT GGATTTGCTG ATGCCGATGA CTATTGGCGG
CGCTCCAGTT GCCGACCCTT TCTACGCAAA ATCCAAATTC CCACTTTACT TCTACACAGC
ATAGATGACC CCTTTTTGCC CCAAGATGCT ATTCCTTCGG CCTCGGATCT CTCCCCCAGC
GTCCAATTAG AACTCAGCAC GGGAGGGGGA CATGTGGGAT TTATTGGTGG TCCCTGGCCA
TGGCGCCCCC AATATTGGTT GGAGGAAAGA ATTCCAGAAT TTCTCAGTCT ATATTTAGAA
ACAGAAACTC CAGGAAAAAT AGCCCTGGCT AGCGGGTGA
|
|---|
| Protein sequence | MIVLSDFQPA WWLPGPHIQT VWGSRFRPPS RIEILWERLE LPDGDFVDLA WSGKEKGPIV
IVIHGLEGSY RSRYASGILK AIAQRGWRGV LLHLRGCSGE PNRLTRSYHS GDTGDFQTLL
SSLRQREPAT PLAAVGYSLG GNILLKWLGE TGSQANLRAA VGISVPFDLA RAAWQLEQGL
SQAYQWSLVK ALQRSVRYKL NHPDCPFDLR TLKGVRTFKE FDDLVTAPLN GFADADDYWR
RSSCRPFLRK IQIPTLLLHS IDDPFLPQDA IPSASDLSPS VQLELSTGGG HVGFIGGPWP
WRPQYWLEER IPEFLSLYLE TETPGKIALA SG
|
|---|
| |