Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0870 |
Symbol | |
ID | 3707175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 951595 |
End bp | 951993 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637737372 |
Product | RNA-binding S4 |
Protein accession | YP_342913 |
Protein GI | 77164388 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.774132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCTG AAGCCGAAAA AATTCGTCTC GATAAATGGC TCTGGGCCGC CCGCTTTTTC AAAACCCGCA GCCTTGCGGT GGAAGCAATC AACGGCGGCA AGGTTCACCT TAATGGCCGC CGGGTTAAAG CAAGTCAAAG GGTTGCCGTG GGCGATAGTT TAATCATTCG CCGCGGCCAC TTCGAACATG AAATCACCGT TGATAAACTG TCCAGGCAGC GCCGCCCCGC AACCGAAGCC TCCCTGCTTT ACCAGGAAAG CGATGCCAGC AAGACAAAGC GGGAAACCCT GGCCATGCAA TTAAGAGAGG CACGGGAATA CCAGGGGCCC GCCGTCCAAG GCCGTCCCTC TAAACGAGAG CGCCGCCAGA TTATCCGTTT TACTCGGAAA AACCAATGA
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Protein sequence | MTSEAEKIRL DKWLWAARFF KTRSLAVEAI NGGKVHLNGR RVKASQRVAV GDSLIIRRGH FEHEITVDKL SRQRRPATEA SLLYQESDAS KTKRETLAMQ LREAREYQGP AVQGRPSKRE RRQIIRFTRK NQ
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