Gene Noc_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0870 
Symbol 
ID3707175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp951595 
End bp951993 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content55% 
IMG OID637737372 
ProductRNA-binding S4 
Protein accessionYP_342913 
Protein GI77164388 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.774132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTG AAGCCGAAAA AATTCGTCTC GATAAATGGC TCTGGGCCGC CCGCTTTTTC 
AAAACCCGCA GCCTTGCGGT GGAAGCAATC AACGGCGGCA AGGTTCACCT TAATGGCCGC
CGGGTTAAAG CAAGTCAAAG GGTTGCCGTG GGCGATAGTT TAATCATTCG CCGCGGCCAC
TTCGAACATG AAATCACCGT TGATAAACTG TCCAGGCAGC GCCGCCCCGC AACCGAAGCC
TCCCTGCTTT ACCAGGAAAG CGATGCCAGC AAGACAAAGC GGGAAACCCT GGCCATGCAA
TTAAGAGAGG CACGGGAATA CCAGGGGCCC GCCGTCCAAG GCCGTCCCTC TAAACGAGAG
CGCCGCCAGA TTATCCGTTT TACTCGGAAA AACCAATGA
 
Protein sequence
MTSEAEKIRL DKWLWAARFF KTRSLAVEAI NGGKVHLNGR RVKASQRVAV GDSLIIRRGH 
FEHEITVDKL SRQRRPATEA SLLYQESDAS KTKRETLAMQ LREAREYQGP AVQGRPSKRE
RRQIIRFTRK NQ