| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0862 |
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| Symbol | |
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| ID | 3707167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 943647 |
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| End bp | 945362 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637737364 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_342905 |
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| Protein GI | 77164380 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.903068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAATA AATTGCAGTA TGCCTGCTCA AGGCCCCTGT CTCTATGGCA CAGGGGCGGA
GGATTGGTGC TGCTCGCATT GGGCATCGCT TTAGGTTGGT TCTTCGCCTT TCCTCTCAAA
TCTAGCTTTG ATATTAGCAA AATCATTCTT GAGGCGGTAA TTTTAGCGGC GGCCTCCATA
ACCTATCCTT TTATTGTACG CTTGGATCGC AATATCTTGA TTAGAGGCTG GGAACTACTC
CTATGCAGTC TTTTGCTGGG CCTATTAGAA GAATTCACCC AGGAACCCCG ACTCTGGGAT
ACTATTATAG AGGGTGCACT AAGGATTTTG GGGCTTACAT TGATCGCCCT TAGTTTTTAT
CGTTCTCAGC AATTATCCCG TGCCCAGCTA CAGAAAAACC AAGCCACGGA GAACCCGGAC
CACCACCCTG TCCAGTATGA TACCCTCACT GGACTTCCCA ATCATACCGT GCTTCGAAAT
CGGTTAGAAC AGGCCATGGG ACCAGCTCGA CAACTGGCTC TTTTGTGCTT AGATCTTGAC
CGGCTTAAGG AAATCAATGA TAGCTTTGGC CATGAGGCTG GCGATAGAGA ATTAGCCCGA
GTCGCCAAGG TTCTCCAGGA CTGTTTAGAA CCCACGGATA CCGCTCTACG AATCGGCGGC
GATGAGTTCG CTATTATTCA AACTCCCGCT CTAGGGGTTG ATAAAGCGAC CCTCCTTGCC
CAACGGCTTC TTGACGCCAT AGCTAGGCCC CATAAAATTC TAGGACATGA AATACATAAC
AGTGCCAGTA TTGGGATTAC CCTCTTTCCC AATGATGGAG ATAAAGCGGA GCAACTGCTC
AAAAATGCTG ATATCGCCAT GTACCACGCA AAACATGAAG GCCAGAACAA CTACCAATTA
TATACCCCCG CCATCAACGC CCGGGCCCAT CCCCGGATGG CGCTAGCCAA AGAGCTGCAA
AGAGCATTTG AGACCGATAA TCTCTACTTG CAGTTCCAAC CCCAACTGAA CCTAGCAACT
CATAGAACCT CGGGTTTTGA GGCGCTGCTC CGCTGGCGCC ATCCCCAACA TGGCATGCTC
GCCCGCCAAA CCTTTATTCG TCTAGCGGAG GAAACGGGAC TTATCGTCCC CATTGGCGCT
TGGGCGTTAG AAACCGCCTG CCAAACTTGT ATGGGCTGGC GGCAACTTCG AGCGGGGCCG
TTACGAGTGG CGGTCAACCT TTCTCCCCGC CAATTTCGCC AACCGGATTT AGCGGGGAGT
ATTGCTACCA TACTAGAGAA GACGGGACTG GCACCATCCG CGCTAGAAAT AGAAGTTACA
GAGGGGCTCC TGCTCGAAGA TATGGACTCC GCCTTCAATA CACTTCAGTC CCTAAGCATC
TTGGGGGTCC ATGTTTCCGT GGATGATTTT GGTACCGGCC ATGCTTCTCT AAGCTACTTA
AAAAATCTCC CCTTTGATAG TATCAAAATT GATCGTTCTT TCATCCATGG CATTCCCGCG
GACTCTGAAA GCCGGACCAT TACTAAAGCT GTTATCGCCC TGGGACATAG CCTCAATCTT
AAGGTAGTGG CGGAAGGCGT GGAAACGCCG GAGCAGTTAC TTTATCTCCA GAAACAAGGC
TGCGATTTAG TCCAAGGTTA CTTCATCAGC AAGCCATTGG ATGTGCCTGA AGCGCAGCGG
TGGTGGGAAG AGAAAGGGGA AAAAGCTTCC TCTTAA
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| Protein sequence | MPNKLQYACS RPLSLWHRGG GLVLLALGIA LGWFFAFPLK SSFDISKIIL EAVILAAASI
TYPFIVRLDR NILIRGWELL LCSLLLGLLE EFTQEPRLWD TIIEGALRIL GLTLIALSFY
RSQQLSRAQL QKNQATENPD HHPVQYDTLT GLPNHTVLRN RLEQAMGPAR QLALLCLDLD
RLKEINDSFG HEAGDRELAR VAKVLQDCLE PTDTALRIGG DEFAIIQTPA LGVDKATLLA
QRLLDAIARP HKILGHEIHN SASIGITLFP NDGDKAEQLL KNADIAMYHA KHEGQNNYQL
YTPAINARAH PRMALAKELQ RAFETDNLYL QFQPQLNLAT HRTSGFEALL RWRHPQHGML
ARQTFIRLAE ETGLIVPIGA WALETACQTC MGWRQLRAGP LRVAVNLSPR QFRQPDLAGS
IATILEKTGL APSALEIEVT EGLLLEDMDS AFNTLQSLSI LGVHVSVDDF GTGHASLSYL
KNLPFDSIKI DRSFIHGIPA DSESRTITKA VIALGHSLNL KVVAEGVETP EQLLYLQKQG
CDLVQGYFIS KPLDVPEAQR WWEEKGEKAS S
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