Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0816 |
Symbol | |
ID | 3707101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 888949 |
End bp | 891249 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637737318 |
Product | Outer membrane protein |
Protein accession | YP_342859 |
Protein GI | 77164334 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.468447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTGA AGTTTGTGAA AAAGCCAATA GCGGTTGCTA TTGTGGCACT GATTCTTATT GGCCAGGTGC TGGCGGCAGA ATTTCAAGAA TTTATAGTTA AGGATATACG GGTCGAGGGA TTGCAACGGA TCTCCGCGGG TACGGTGTTT AATTATCTTC CGGTAAAAGT CGGCGATACG ATTGATAGCC AGCGGGTTAA GGATACTATT CGTGGACTGT TCAGGACACG GTTTTTTAAG GACGTGCGGG TAGAGCGCGA GGGCAATGTT CTAGTTGTGG TGGTGGTAGA GAGGCCTACG ATTACTAGCA TCCAATTTGT GGGTAATAAA GAACTTAAAG GCGATCAGCT TTCGCAGGCT CTTAAACAAG TAGGGTTTGC GGAGGGGCGT GTTTTTGATC GAGCGCTGCT GGAGAAGGTA GAACTGGAAC TGCAACGCCA ATATTTTAGT CGTGGTAAAT ATGGCGTTAA AATTGATACG ACAGTGACTC CTTTGGCCCG TAATCAGGTA GGTGTTACCG TAAATATTAA AGAGGGCGCT ATTGCTAAGA TTGGCGGTAT CAATATCATA GGGAATCATG CTTTTAGTGA AGATGAGCTT TTGGGTGCAT TTCAGTTAAG TACTTCGAAC TGGCTATCGT TTTTTACTCA TGATGATCAG TATTCCCGGC AGAAATTGGC GGCGGATCTC GAAGCGTTAC GCTCTTATTA TTTAGATCGC GGCTATATCA ACTTCAATAT TGATTCTACT CAGGTTTCAA TAACGCCTGA TAAAAAAAGG GTATTTATTA CTGTCAATGT CACTGAAGGT GATCGCTACC AAATTGGTGA AGTTAAGTTA GCCGGGGATT TAGTTCTTCC CCATGAGAAA CTGTTTGATG CTTTAACTGT GGCTTCGGGA AAAGTTTTTT CACGCAAGGC CATAGCGGAA AGTACAACTC ATATTACTGA TTTGTTAGGA AATAAGGGAT ATGCGTTTGC CAATGTAAAT GCTGTGCCAG AAATAAATGA AGAAGAAAAA AAGGTAAATT TAACCTTTTT TGTTGATCCA GGTAAGCGTG CTTATGTTCG GCGGGTCAAT ATTTCAGGGA ATACCAAAAC CCGGGATGAG GTGCTTCGCC GGGAGATACG TCAACAGGAG GGAGGATGGG TAGCCACCGA GTTGATCAAT CGTTCCCGGT TGCGGATCCA ACGCTTAGGC TATTTTGAAG ATGTTAATGT GGAGACAGTG CCGGTTCCGG GAACTACGGA TCAAGTTGAT GTGAATTTTA GCGTAGTGGA ACGCCCTTCT GGATCCCTGT CGGCAGGTTT AGGTTTTTCT CAATCCCAAG GTTTCATTTT TAATGCTAGT ATTACCCAGC GAAACTTTCT GGGGAGTGGT AAGCATGTAA GCTTTGCTTT TAATAATAGT CAGGTGAACA CCATCTATAG TTTTGGATAT ACTAATCCCT ACTATACTAT TGATGGTATT AGTCGCGGAT TTAACCTTTT CTATCGTGAA ACCAGTCCTT TTAGAGCCAA TATTGCCCGT TTTAGTACCG ATGCGTATGG CGGCGATATG CATTTCGGTA TTCCGGTCAC TGAAAATGAT AGGGTGCGCC TTGGTTTTGG TTACCAGCAT ACGAAGGTTA ATCTAACTGA AAATTCTCCC CAGGAATACC ATAAGTTTGT AGATAGTGAA GGAAATAAGT TTGATACTTT TAATACGAAT TTAGGCTGGT CTCGTGATAG CCGGAATAAT GCTCTCTTAA CGACTGATGG CAGTATTCAA AGCCTCTTCG GTGAGATTAC CCTGCCGCTA GGTAGTTTGC AATTTTTTAA GTTTGGTTAT CGTCACCGTT GGTTTCATCC TTTATCTAAA TCTCTTACTT TGATGCTAAA TGGCGATGTA GCCTATGGCA ATGCCTATGG AAATACCGAA GAGTTCCCTT TCTTTGAGAA CTTTTTCGCT GGTGGTATAC ATAGTGTGCG CGGCTTCAAG GCTAATACGC TTGGTCCAAA GGCATCAGAT GGTACTACCC TTGGCGGCAA TTTTAAGATG ACAGGGACTA TTGAGGTATT CTTTCCTGTT CCCTTTGCGG AAGAATTAAA GTCCGTGCGT TTGGGTACTT TTATTGATGC AGGGAATGTC TACGGTATAG ATCAAGATAT TAGCCTGCAA GGCCTGCGGT ACTCAGCTGG AATTTCAGCC AATTGGCTAT CGCCATTTGG TAGCCTGCAA TTTAGTTTTG CGAAAGCCTT TAATGTTCAG CCAAATGACC GGCCTGAAGT ATTCCAGTTC TCCCTGGGAA CTTCATTTTA G
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Protein sequence | MSLKFVKKPI AVAIVALILI GQVLAAEFQE FIVKDIRVEG LQRISAGTVF NYLPVKVGDT IDSQRVKDTI RGLFRTRFFK DVRVEREGNV LVVVVVERPT ITSIQFVGNK ELKGDQLSQA LKQVGFAEGR VFDRALLEKV ELELQRQYFS RGKYGVKIDT TVTPLARNQV GVTVNIKEGA IAKIGGINII GNHAFSEDEL LGAFQLSTSN WLSFFTHDDQ YSRQKLAADL EALRSYYLDR GYINFNIDST QVSITPDKKR VFITVNVTEG DRYQIGEVKL AGDLVLPHEK LFDALTVASG KVFSRKAIAE STTHITDLLG NKGYAFANVN AVPEINEEEK KVNLTFFVDP GKRAYVRRVN ISGNTKTRDE VLRREIRQQE GGWVATELIN RSRLRIQRLG YFEDVNVETV PVPGTTDQVD VNFSVVERPS GSLSAGLGFS QSQGFIFNAS ITQRNFLGSG KHVSFAFNNS QVNTIYSFGY TNPYYTIDGI SRGFNLFYRE TSPFRANIAR FSTDAYGGDM HFGIPVTEND RVRLGFGYQH TKVNLTENSP QEYHKFVDSE GNKFDTFNTN LGWSRDSRNN ALLTTDGSIQ SLFGEITLPL GSLQFFKFGY RHRWFHPLSK SLTLMLNGDV AYGNAYGNTE EFPFFENFFA GGIHSVRGFK ANTLGPKASD GTTLGGNFKM TGTIEVFFPV PFAEELKSVR LGTFIDAGNV YGIDQDISLQ GLRYSAGISA NWLSPFGSLQ FSFAKAFNVQ PNDRPEVFQF SLGTSF
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