Gene Noc_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0811 
Symbol 
ID3707096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp883964 
End bp884527 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID637737313 
Productribosome recycling factor 
Protein accessionYP_342854 
Protein GI77164329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.415251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGA TTGATGAAAT TCAGGAAGAT GCGGCCCAGC GCATGGATAA GAGCCTTAAT 
GCTCTGAAAC AAGCTTTTGC TAGACTGCGG GCAAATCGAG CCCATACGAG TCTTCTTGAC
CATATTACCG TTTCCTATTA CGGCAATAAT GTACCGCTGA ACCAAGTAGC TAATGTCTCT
GTGGAAGATG CTCGCACTTT GACGGTGACT CCTTGGGAAA GGCAAATGGT CCCAGTCATC
GAGAAGGCGA TTATGACTTC TGAGCTTGGG CTTAATCCCG TTACCGCAGG GACGGTTATT
CGGGTACCTT TACCTGTTCT AACTGAAGAG CGGCGGCGGG AAATGGTTCG CCTCGTCAGG
CAAGAGGCGG AAGCAGCACG GGTAGCTATG CGTAATATCC GGCGCGACAG TAACCATACC
ATCAAAGAAC TGATTAAGGA AAAAGAGATT AGTGAGGATG ATCAACGCCG TGCTGAGGAA
GCCATACAAA AAATCACTGA TAATCATATT ACCCAAGTCG ATGAGTTGTT AGCGGTGAAA
GAACAGGATT TGATGGAAGT TTGA
 
Protein sequence
MIMIDEIQED AAQRMDKSLN ALKQAFARLR ANRAHTSLLD HITVSYYGNN VPLNQVANVS 
VEDARTLTVT PWERQMVPVI EKAIMTSELG LNPVTAGTVI RVPLPVLTEE RRREMVRLVR
QEAEAARVAM RNIRRDSNHT IKELIKEKEI SEDDQRRAEE AIQKITDNHI TQVDELLAVK
EQDLMEV