Gene Noc_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0778 
Symbol 
ID3707044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp850483 
End bp851565 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content53% 
IMG OID637737280 
Productaspartate/ornithine carbamoyltransferase 
Protein accessionYP_342821 
Protein GI77164296 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.154324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAAA AATTTGATCC CTTATTAAGA AAACCCTTAC AACCGAAGGA TGATACAGCG 
GGGATTGAAC GGCCCTTGGC TTTAATGGAG CAAGTGCTGG AAGATCCCGC TCCGTTAGTG 
GGGTTGGCTA ACCGCCCCGT GCTTAGCGCC CGGCAATTCG ACCGGGATAA GATCATTCAA 
CTGAGCCGCT TGGCTGCCCT TTATGAAACC ACCCCTACCT GGTTACAGCT CCCCCTAGCC 
GGGAAAATCC TCATCAATGC CTTCTATGAG CCTAGCACCC GGACCCGCCT GTCATTCGAA 
AGTGCCTGGC ATCGACTGGG AGGCGATGTG ATGCCCATCA CCGATCCGGC TACCACCGGC 
ATCGCTAAGG GCGAAACCTT GGCCGATGTA GCCGAAATGT TCAATAATTA CGGAGACTTG 
GTCGTATTGC GGGATAGCAG CGAAGAGGCC GTCTACCAGA TGCTGGAGTC CTTGCGCATT 
CCTATCATCA ATGCCGGTAA CGGTATCGAT GAGCATCCCA CTCAAGCCTT AGCCGACCTG 
TATACGCTGT TCAAATGGCG ACCGCAGCTT ATGGCGTCTA AGGTTTCTGC CTCGGCCCAA 
ATACGAATAG GCGTTGTGGG CGCGCCCCGC TACATGCGCA CGGTGCGCAG TCTACTGTTG 
TTCCTAGCCC TATTTGCACC GGCAATAAAA GAGGTAGTCG TTATCTGCCA GCAAGAAGAA 
GTATTTGCAA AAGAGCAACG AGAAGAATTA GCCCTTTCCG GCCTTACCCT TCGAACGGCT 
CGCCAACTCA ATCCTGAACT TCCCGCCCTG GACGTGGTAT ATATTAATTC CATCGCTTGG 
CGGGGGGATA GCTTCGAAAA AATTGGGGAA GACTTGAGAC TTTGCCGGTC CTCTCCCTTC 
AAACCAGGGG CAATTATTCT CCATCCTTTA GCCCGGGGAA AAGAACTCGC CACCGATTTG 
GATAACACAG AGCATAACTG GTACTTTGCC CAGGCTCGGG GCGCGGTCTT TATGCGCATG 
GCCCTGCTCA CGACCCTTGT TCAACGAATC GATCAAGTAA TGGATACCCC CATGCAAAGC 
TAA
 
Protein sequence
MVKKFDPLLR KPLQPKDDTA GIERPLALME QVLEDPAPLV GLANRPVLSA RQFDRDKIIQ 
LSRLAALYET TPTWLQLPLA GKILINAFYE PSTRTRLSFE SAWHRLGGDV MPITDPATTG 
IAKGETLADV AEMFNNYGDL VVLRDSSEEA VYQMLESLRI PIINAGNGID EHPTQALADL 
YTLFKWRPQL MASKVSASAQ IRIGVVGAPR YMRTVRSLLL FLALFAPAIK EVVVICQQEE 
VFAKEQREEL ALSGLTLRTA RQLNPELPAL DVVYINSIAW RGDSFEKIGE DLRLCRSSPF 
KPGAIILHPL ARGKELATDL DNTEHNWYFA QARGAVFMRM ALLTTLVQRI DQVMDTPMQS