| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0769 |
|---|
| Symbol | |
|---|
| ID | 3707035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 836945 |
|---|
| End bp | 838618 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637737271 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_342812 |
|---|
| Protein GI | 77164287 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.303985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTT ACTTCCGTAT TGCGCTGTTT GTCTGGCTGA TTTTTGGGGG CGGTTTGGGG
CTTGCCCGGG AGGGCCCGCC GGCGGCGGCA ATTGCCAGCG CCCATCCCCT GGCTACCCAG
GCAGGCCATG AGGTGCTGGC GGCGGGAGGG AATGCCTTTG ATGCGGCTGT GGCGGTCAGC
GCAGCCCTGG CGGTGGTGGA GCCCTATAGT TCGGGATTGG GTGGAGGTGG CTTTTGGTTG
CTTCATCTTG CCAAGGAGGG CACCGATGTC ATGCTTGACG GCCGGGAGCG GGCGCCCTTG
GCGGCAACCG CCCGGATGTA TCTGGATGAA ACCGGCGCAT TGATTCAGGG GGCCTCCATC
GATGGACCCC TAGCGGCGGC CATCCCTGGC CAGCCGGCGG CTTTGGCCCA TTTGGCGGAG
CATTATGGCC GTTTATCCCT TGCTAAAACC TTGGCGCCGG CCATGGGTTA TGCTCGGGAA
GGATTTGAGG TAGATAAGCC TTACCGCCGC CGGGCGGCTT TTCGACTCCC GGTGCTTAAA
CGCTGGCCCG CCGCCGGTCA GGTATTCCTG GCCGATGGAA AAGTCCCCGT CCTGGGGGCG
CGGATTAAGC AACCGGCTTT GGCGGCGACC CTGGAAGCCC TTGCCCAACG GGGCGCGGCG
GGTTTTTACC AGGGGCCGGT GGCGGAAGCC CTGGTGGCGG GGGTGCGAGC CGCGGGCGGA
ATCTGGAGTC GGGAAGATTT GGCTCAATAT CAAGTGGTGG AAAGAGCGCC GGTGCGGGGC
CAGTACCGGG GCTTTAAAAT TATCTCCGCT AGCCCGCCTT CCTCGGGGGG CATTGCCTTA
TTAACGATGC TGAATATTCT GGCCGAGGAG GATCTTTCCA CCCTGCCGGC CGCTACTCGC
ACCCATCTGA TTATCGAGGC CATGCGCCGG GCTTACCGGG ACCGGGCGCA GTATCTGGGC
GATCCGGATT TTGTGGATGT TCCTGTGCAA AGGTTGACTC ATCCCTATTA TGGCGCTGGC
CTGCGGGCCG GTATTCGCCT GGATCGGGCC ACGTCCAGTG CTGATCTTCC CGGTATTCAG
AGTCAAGATA GTGGACCCCA TACGACGCAT TTTTCTGTTA TCGACCGGGA AGGAAATCGG
GTTGCCGCCA CGCTCAGTAT CAATTACCCT TTCGGCTCGG GTTTCATGCC GCCCGGCACG
GGAGTTCTGC TCAATGATGA GATGGACGAC TTTGCGGCCG CACCTGGCGT GCCTAATGTC
TATGGCCTGA TTGGCAGCCA GGCGAATGCC ATAGCGCCGG GGAAAAGGCC CTTATCGAGC
ATGACTCCCA CCTTCGTGGA GAACGAACAG GGGGTGTTGG TATTGGGAAC GCCAGGGGGG
AGCCGTATTA TCACCATGGT GTTACTCGGA GTTCTGGAGC ACGTGGCGGG GGCGGATTTA
ACCCACCTGG TTTCCCAGCC TCGCTTTCAC CATCAGTATT TTCCTGATGA GGTGGAATAT
GAACCCCAGG CTTTTGCTGG AGAGCTTGTC AAAGACTTGC AAGCTCTGGG GCATTCCCTG
TCGCCCCGTG AACGGCCCTG GGGGAATATG CAGGCGGTAT TTTGGGACCG GGCGCGGAAG
CGGGTTAAGG CGGCCAGTGA TCCGCGGGGT GTGGGAGAGG CGGTGGTCCG CTGA
|
|---|
| Protein sequence | MTIYFRIALF VWLIFGGGLG LAREGPPAAA IASAHPLATQ AGHEVLAAGG NAFDAAVAVS
AALAVVEPYS SGLGGGGFWL LHLAKEGTDV MLDGRERAPL AATARMYLDE TGALIQGASI
DGPLAAAIPG QPAALAHLAE HYGRLSLAKT LAPAMGYARE GFEVDKPYRR RAAFRLPVLK
RWPAAGQVFL ADGKVPVLGA RIKQPALAAT LEALAQRGAA GFYQGPVAEA LVAGVRAAGG
IWSREDLAQY QVVERAPVRG QYRGFKIISA SPPSSGGIAL LTMLNILAEE DLSTLPAATR
THLIIEAMRR AYRDRAQYLG DPDFVDVPVQ RLTHPYYGAG LRAGIRLDRA TSSADLPGIQ
SQDSGPHTTH FSVIDREGNR VAATLSINYP FGSGFMPPGT GVLLNDEMDD FAAAPGVPNV
YGLIGSQANA IAPGKRPLSS MTPTFVENEQ GVLVLGTPGG SRIITMVLLG VLEHVAGADL
THLVSQPRFH HQYFPDEVEY EPQAFAGELV KDLQALGHSL SPRERPWGNM QAVFWDRARK
RVKAASDPRG VGEAVVR
|
|---|
| |