Gene Noc_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0601 
Symbol 
ID3706833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp648698 
End bp649027 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content52% 
IMG OID637737109 
Productsmall multidrug resistance protein 
Protein accessionYP_342650 
Protein GI77164125 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.94236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTGGA TTTTTTTGTC ACTAGCTATC CTGGCGGAAG TGATTGCCAC ATCGTCCCTG 
AAGGCTGCGG CTGGATTCAC CCGGCTCGGG CCATCACTGG CCGTTATTCT CGGCTACGGC
GCAGCCTTTT ATTTTCTATC GCTTACCCTG CGCACCCTCC CTGTGGGGGT TGCTTATGCG
GTTTGGTCAG GGGTTGGCGT AGCCTTAATC ACTTTGGTTG CATGGCTTTT TTATGGGCAG
ACTCTAGATA CACCCGCACT CCTTGGACTC GCGCTCATCA TAGCAGGCGT AGTGGTACTC
AATGTTTTTT CAAAATCCAT TGCCCCTTAA
 
Protein sequence
MQWIFLSLAI LAEVIATSSL KAAAGFTRLG PSLAVILGYG AAFYFLSLTL RTLPVGVAYA 
VWSGVGVALI TLVAWLFYGQ TLDTPALLGL ALIIAGVVVL NVFSKSIAP