Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0599 |
Symbol | uvrD |
ID | 3706831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 644991 |
End bp | 647144 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637737107 |
Product | DNA-dependent helicase II |
Protein accession | YP_342648 |
Protein GI | 77164123 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTT CTTCTTTACT CAACCCACTG AATAAAGCCC AGCGTGAGGC CGCCGCCGCC CCGCCAGGGC ACCATTTAGT GCTTGCCGGA GCAGGCAGTG GCAAAACCCG AGTCCTAGTC CATCGAATGG CTTGGCTGAT CCGCAGTCAA GGGATTGCTC CTGTAAATCT CCTGGCCGTC ACTTTTACCA ATAAGGCCGC CGGAGAAATG CGGGGGCGCA TCGAGGAATT ACTAGAAACG CCTGTGGGTG GCATGTGGGT GGGAACCTTT CATGGCATTG CCCACCGCTT GTTACGGGCC CATTGGCAAG AAGCCCAGCT TCCCCAGGAC TTTCAAATTC TGGACTCCGA GGATCAATAC CGCTTGATCC GCCGGATTTT GCAGAATCTC AATCTGGATG AAAGCCGCTG GCCGCCACGC CAGGCCCAAT GGTTTATCAA TAGCCATAAA GATAAAGGGC TCCGCCCCCA GCACCTTGAA GAGGGCACTA ATCCCCATGT TCGGCAGCAA ATTCGTATCT ATCATGATTA CCAAAGCCAT TGCGAGCGCA GCGGTTTGGT GGACTTTGCC GAGCTTTTGT TGCGGGCTCA CGAACTATTG CGGGACCATG CCCATGTACT CCAACACTAC CAAAACCGTT TTACCCATGT TTTAGTGGAT GAATTCCAAG ATACCAACGC CATTCAGTAC GCTTGGCTGC GATTATTAGC CGGCCATCAG GGAGAACTCT TTATTGTCGG TGATGACGAT CAATCTATCT ATGGCTGGCG GGGAGCGCAG ATTGAAAATA TTCAGCAGCT AAGCCGGGAT TTTCCCGCTA TACGGACACT TCGCCTGGAA CAAAATTACC GCTCAACGGG TGTTATCCTC GCTGCGGCTA ATGCAGTCAT TGCCAATAAT ACAGAGCGTT TAGGGAAAAA TCTTTGGACG GAGAGCGAAG ATGGCGAGCC TATTCAAATC TACCAAGCCT TTAATGAACG GGACGAAGCC CATTTTATAA CCGAACGTAT CCATGCCTGG AAAGCCCAAG GGGGAATGGG CGCCGATACC GCTGTACTCT ACCGCTCCAA TGCTCAATCC CGAATAGTAG AAGCCGCCTT GGTCGAGGCA GGAATACCCT ATCGGGTCCA TGGGGGGCTG CGGTTTTTCG AGCGGGCCGA AATTAAGGAT GCCCTGGCTT ACCTGCGTTT GGTGACCCAT CAAAATGATG ATTCCGCCTT CGAGCGAATT GTCAATACCC CGCCACGGGG TATTGGCGAA AGAACGCTCT CCCAAGTCAG GGAACACGCC CGGCAGGCAG GGGTTTCCCT ATGGCAGGCC ACCGTCCAGC TTGTCGCCCA GCAGCACCTC CCTGGGCGCA GCGCTACCGC TCTGCGGCAC TTTCACTCGC TTATGGAGCG CATGGCCACA GATATCATGG GGCTGTCCCT TCCCGCACAA ATTGAGAGCG TGCTCGACCA TAGTGGTTTG CTCAACCACT ATCGCAAAGA CCGCGGTGAA AAATCTCAAT CACGCCTGGA TAACTTGAAA GAGCTCATTA ATGCCGCTTC CCAATTTAAA CCCGAAGATC CAAGTCTGGA AACACTATCA GAATTTTTAG CCCATGCTGC CCTAGAGTCG GGGGGGACTC AAGCTGAAGG CTGGGAGGAC TGCGTGCAAT TGATGACTTT GCATGCGGCG AAGGGATTGG AATTCCCCCT AGTATTTATG ATCGGCATGG AAGAAGGGCT ATTTCCAAGC CCCCAAAGCC GCAATGAACC GGGGCGACTG GAAGAAGAAC GCCGCCTCTG CTACGTGGGG ATGACTCGAG CTCAGCGCCA CCTCTATCTC ATTTACGCAA CGCGCCGCTG GTTGTATGGT TCGGACAGCT ATCCCCAGCC TTCCCGTTTT CTCCATGAGA TTCCCACCGA GCTCACCTCC GAGCAGCAGC CCCACATCGA TATTATTCAT CCCGGCGGTG CTCCCCAGCC TACCGCACCT GTTTCTTCGA TAGATGGATT TCGAATCGGC CAACGGGTCA ACCACCCCAA GTTTGGCGAG GGAGTCGTAT TAAATTTAGA GGGAAAAGAC AACCAGAGAC GCGTCCAAGT CAATTTTATT CAAGGAGGGG CTAAATGGCT GGTGGTGATC TACGCTAACC TCCAAATCAT TTAA
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Protein sequence | MDISSLLNPL NKAQREAAAA PPGHHLVLAG AGSGKTRVLV HRMAWLIRSQ GIAPVNLLAV TFTNKAAGEM RGRIEELLET PVGGMWVGTF HGIAHRLLRA HWQEAQLPQD FQILDSEDQY RLIRRILQNL NLDESRWPPR QAQWFINSHK DKGLRPQHLE EGTNPHVRQQ IRIYHDYQSH CERSGLVDFA ELLLRAHELL RDHAHVLQHY QNRFTHVLVD EFQDTNAIQY AWLRLLAGHQ GELFIVGDDD QSIYGWRGAQ IENIQQLSRD FPAIRTLRLE QNYRSTGVIL AAANAVIANN TERLGKNLWT ESEDGEPIQI YQAFNERDEA HFITERIHAW KAQGGMGADT AVLYRSNAQS RIVEAALVEA GIPYRVHGGL RFFERAEIKD ALAYLRLVTH QNDDSAFERI VNTPPRGIGE RTLSQVREHA RQAGVSLWQA TVQLVAQQHL PGRSATALRH FHSLMERMAT DIMGLSLPAQ IESVLDHSGL LNHYRKDRGE KSQSRLDNLK ELINAASQFK PEDPSLETLS EFLAHAALES GGTQAEGWED CVQLMTLHAA KGLEFPLVFM IGMEEGLFPS PQSRNEPGRL EEERRLCYVG MTRAQRHLYL IYATRRWLYG SDSYPQPSRF LHEIPTELTS EQQPHIDIIH PGGAPQPTAP VSSIDGFRIG QRVNHPKFGE GVVLNLEGKD NQRRVQVNFI QGGAKWLVVI YANLQII
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